CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPU_014802
(
Strongylocentrotus purpuratus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SPU_014802
T223719_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hlx
M00485_2.00
Mus musculus
NNNAWND
HNWTNNN
PBM
Berger et al.(2008)
Hlx1_2350
0.851
0.860
H2.0
M06489_2.00
Drosophila melanogaster
WTWATDA
THATWAW
B1H
Mathelier et al.(2014)
MA0448.1
0.843
0.754
H2.0
M06250_2.00
Drosophila melanogaster
TWWWWDA
THAWWWA
B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170
0.843
0.754
H2.0
M06251_2.00
Drosophila melanogaster
WTWATTRN
NYAATWAW
B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170
0.843
0.754
Dbx
M02128_2.00
Drosophila melanogaster
WTTAATTA
TAATTAAW
PBM
Weirauch et al.(2014)
pTH6051
0.733
0.667
Dbx
M06550_2.00
Drosophila melanogaster
TTWATKA
TMATWAA
B1H
Mathelier et al.(2014)
MA0174.1
0.733
0.667
Dbx1
M00451_2.00
Mus musculus
WTTAATTA
TAATTAAW
PBM
Berger et al.(2008)
Dbx1_3486
0.733
0.649
Dbx2
M00499_2.00
Mus musculus
NNDTNNN
NNNAHNN
PBM
Berger et al.(2008)
Dbx2_3487
0.713
0.614
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPU_014802-tr
Homeodomain
332
388
SWSRAVFTSLQRKGLEKRFEIQKYVNKPERRQLASALGLSDAQVKVWFQNRRMKWRH
Links
Other
Homeodomain
family TFs
Other
Strongylocentrotus purpuratus
TFs
264 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB07644.1
Alternaria brassicicola
AB07644.1
N
fgenesh1_pg.00609_#_575
Aspergillus carbonarius
fgenesh1_pg.00609_#_575
N
ACLA_045490
Aspergillus clavatus
CADACLAG00004978
N
CADAFLAG00005113
Aspergillus flavus
CADAFLAG00005113
N
AFUA_4G06170
Aspergillus fumigatus
CADAFUAG00008511
N
ANIA_04324
Aspergillus nidulans
CADANIAG00006139
N
CADANGAG00003756
Aspergillus niger
CADANGAG00003756
N
CADAORAG00008051
Aspergillus oryzae
CADAORAG00008051
N
EURHEDRAFT_516818
Aspergillus ruber
EURHEDRAFT_516818
N
ATEG_06807
Aspergillus terreus
CADATEAG00006231
N
BAUCODRAFT_118710
Baudoinia compniacensis
BAUCODRAFT_118710
N
COCC4DRAFT_129366
Bipolaris maydis
COCC4DRAFT_129366
N
COCMIDRAFT_26299
Bipolaris oryzae
COCMIDRAFT_26299
N
COCSADRAFT_39300
Bipolaris sorokiniana
COCSADRAFT_39300
N
COCVIDRAFT_18953
Bipolaris victoriae
COCVIDRAFT_18953
N
COCCADRAFT_28724
Bipolaris zeicola
COCCADRAFT_28724
N
BDDG_08069
Blastomyces dermatitidis
BDDG_08069
N
Bcin01g08080
Botrytis cinerea
Bcin01g08080
N
PVAR5_4132
Byssochlamys spectabilis
PVAR5_4132
N
A1O1_06448
Capronia coronata
A1O1_06448
N
A1O3_05959
Capronia epimyces
A1O3_05959
N
PV04_06890
Capronia semiimmersa
PV04_06890
N
Z519_03993
Cladophialophora bantiana
Z519_03993
N
G647_06053
Cladophialophora carrionii
G647_06053
N
PV07_03724
Cladophialophora immunda
PV07_03724
N
PV07_12548
Cladophialophora immunda
PV07_12548
N
A1O5_08664
Cladophialophora psammophila
A1O5_08664
N
A1O7_06479
Cladophialophora yegresii
A1O7_06479
N
estExt_fgenesh1_kg.C_60062
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_60062
N
CSUB01_08232
Colletotrichum sublineola
CSUB01_08232
N
W97_00412
Coniosporium apollinis
W97_00412
N
DOTSEDRAFT_68488
Dothistroma septosporum
DOTSEDRAFT_68488
N
A1O9_08053
Exophiala aquamarina
A1O9_08053
N
HMPREF1120_03961
Exophiala dermatitidis
HMPREF1120_03961
N
PV10_08689
Exophiala mesophila
PV10_08689
N
PV06_02579
Exophiala oligosperma
PV06_02579
N
PV11_06703
Exophiala sideris
PV11_06703
N
PV05_09061
Exophiala xenobiotica
PV05_09061
N
Z517_00960
Fonsecaea pedrosoi
Z517_00960
N
HCBG_02231
Histoplasma capsulatum
HCBG_02231
N
LEMA_P055360.1
Leptosphaeria maculans
LEMA_P055360.1
N
MPH_03233
Macrophomina phaseolina
MPH_03233
N
MBM_05804
Marssonina brunnea
MBM_05804
N
fgenesh1_pg.C_scaffold_1000709
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_1000709
N
estExt_fgenesh1_pg.C_chr_11225
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_11225
N
UCRNP2_8887
Neofusicoccum parvum
UCRNP2_8887
N
NFIA_109970
Neosartorya fischeri
CADNFIAG00009928
N
PABG_04201
Paracoccidioides brasiliensis
PABG_04201
N
PAAG_04399
Paracoccidioides sp lutzii
PAAG_04399
N
PMAA_027450
Penicillium marneffei
PMAA_027450
N
GMDG_03916
Pseudogymnoascus destructans
GMDG_03916
N
GMDG_02083
Pseudogymnoascus destructans
GMDG_02083
N
PTT_04046
Pyrenophora teres
PTT_04046
N
PTRG_00938
Pyrenophora triticirepentis
PTRG_00938
N
Z518_02769
Rhinocladiella mackenziei
Z518_02769
N
SBOR_0679
Sclerotinia borealis
SBOR_0679
N
SETTUDRAFT_98045
Setosphaeria turcica
SETTUDRAFT_98045
N
SEPMUDRAFT_145925
Sphaerulina musiva
SEPMUDRAFT_145925
N
SPBR_01645
Sporothrix brasiliensis
SPBR_01645
N
HMPREF1624_03632
Sporothrix schenckii
HMPREF1624_03632
N
PMAA_027450
Talaromyces marneffei
PMAA_027450
N
TSTA_071310
Talaromyces stipitatus
TSTA_071310
N
VHEMI03871
Torrubiella hemipterigena
VHEMI03871
N
GSTUM_00009240001
Tuber melanosporum
GSTUM_00009240001
N
PV09_02366
Verruconis gallopava
PV09_02366
N
Mycgr3G107497
Zymoseptoria tritici
Mycgr3G107497
N