ENSBTAP00000006356-D1 (Bos grunniens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ENSBTAP00000006356-D1 T225832_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000006356-D1 Homeodomain 99 158

Links

Other Homeodomain family TFs
Other Bos grunniens TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB00260.1 Alternaria brassicicola AB00260.1 I 0.000
AOL_s00075g18 Arthrobotrys oligospora AOL_s00075g18 I 0.000
fgenesh1_pm.00866_#_491 Aspergillus carbonarius fgenesh1_pm.00866_#_491 I 0.000
ACLA_040020 Aspergillus clavatus CADACLAG00003199 I 0.000
CADAFLAG00002414 Aspergillus flavus CADAFLAG00002414 I 0.000
CADANGAG00002342 Aspergillus niger CADANGAG00002342 I 0.000
CADAORAG00001369 Aspergillus oryzae CADAORAG00001369 I 0.000
EURHEDRAFT_516147 Aspergillus ruber EURHEDRAFT_516147 I 0.000
ATEG_04171 Aspergillus terreus CADATEAG00009984 D 0.000
M437DRAFT_82573 Aureobasidium melanogenum M437DRAFT_82573 I 0.000
M438DRAFT_345498 Aureobasidium pullulans M438DRAFT_345498 I 0.000
AUEXF2481DRAFT_40998 Aureobasidium subglaciale AUEXF2481DRAFT_40998 I 0.000
COCC4DRAFT_127765 Bipolaris maydis COCC4DRAFT_127765 I 0.000
COCMIDRAFT_2266 Bipolaris oryzae COCMIDRAFT_2266 I 0.000
COCSADRAFT_125307 Bipolaris sorokiniana COCSADRAFT_125307 I 0.000
COCVIDRAFT_88516 Bipolaris victoriae COCVIDRAFT_88516 I 0.000
COCCADRAFT_90442 Bipolaris zeicola COCCADRAFT_90442 I 0.000
BDDG_04023 Blastomyces dermatitidis BDDG_04023 I 0.000
Bcin01g06200 Botrytis cinerea Bcin01g06200 I 0.000
PVAR5_3236 Byssochlamys spectabilis PVAR5_3236 I 0.000
CaO19.7017 Candida albicans CaO19.7017 I 0.000
CD36_70900 Candida dubliniensis CD36_70900 I 0.000
CAGL0G07249g Candida glabrata CAGL0G07249g I 0.000
PGUG_00382 Candida guilliermondii PGUG_00382 I 0.000
CLUG_04271 Candida lusitaniae CLUG_04271 I 0.000
G210_2310 Candida maltosa G210_2310 I 0.000
CORT_0H00310 Candida orthopsilosis CORT_0H00310 I 0.000
CPAG_00635 Candida parapsilosis CPAG_00635 I 0.000
CANTEDRAFT_113041 Candida tenuis CANTEDRAFT_113041 I 0.000
CTRG_04888 Candida tropicalis CTRG_04888 I 0.000
A1O1_06861 Capronia coronata A1O1_06861 I 0.000
A1O3_10315 Capronia epimyces A1O3_10315 I 0.000
PV04_10601 Capronia semiimmersa PV04_10601 I 0.000
Z519_06193 Cladophialophora bantiana Z519_06193 I 0.000
G647_08323 Cladophialophora carrionii G647_08323 I 0.000
A1O5_07631 Cladophialophora psammophila A1O5_07631 I 0.000
A1O7_09958 Cladophialophora yegresii A1O7_09958 I 0.000
CLUG_04271 Clavispora lusitaniae CLUG_04271 I 0.000
CIMG_09634 Coccidioides immitis CIMG_09634 I 0.000
CPC735_023880 Coccidioides posadasii CPC735_023880 I 0.000
estExt_Genewise1.C_11468 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11468 I 0.000
H072_1197 Dactylellina haptotyla H072_1197 I 0.000
DEHA2F22286g Debaryomyces hansenii DEHA2F22286g I 0.000
DOTSEDRAFT_142040 Dothistroma septosporum DOTSEDRAFT_142040 I 0.000
DRE_07453 Drechslerella stenobrocha DRE_07453 I 0.000
EPUS_07220 Endocarpon pusillum EPUS_07220 I 0.000
A1O9_06349 Exophiala aquamarina A1O9_06349 I 0.000
HMPREF1120_01778 Exophiala dermatitidis HMPREF1120_01778 I 0.000
Z517_12283 Fonsecaea pedrosoi Z517_12283 I 0.000
HCBG_03004 Histoplasma capsulatum HCBG_03004 I 0.000
KAFR_0C05600 Kazachstania africana KAFR_0C05600 I 0.000
KNAG_0B03460 Kazachstania naganishii KNAG_0B03460 I 0.000
KLLA0_B01584g Kluyveromyces lactis KLLA0_B01584g I 0.000
KLTH0G04686g Kluyveromyces thermotolerans KLTH0G04686g I 0.000
Kwal_18450 Kluyveromyces waltii Kwal_18450 I 0.000
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I 0.000
LALA0_S09e00364g Lachancea lanzarotensis LALA0_S09e00364g I 0.000
KLTH0G04686g Lachancea thermotolerans KLTH0G04686g I 0.000
LEMA_P079180.1 Leptosphaeria maculans LEMA_P079180.1 I 0.000
LELG_05443 Lodderomyces elongisporus LELG_05443 I 0.000
MPH_01872 Macrophomina phaseolina MPH_01872 I 0.000
MBM_06173 Marssonina brunnea MBM_06173 I 0.000
PGUG_00382 Meyerozyma guilliermondii PGUG_00382 I 0.000
MCYG_03024 Microsporum canis MCYG_03024 I 0.000
MGYG_00197 Microsporum gypseum MGYG_00197 I 0.000
GNLVRS01_PISO0M03048g Millerozyma farinosa GNLVRS01_PISO0M03048g I 0.000
GNLVRS01_PISO0N03203g Millerozyma farinosa GNLVRS01_PISO0N03203g I 0.000
HPODL_02118 Ogataea parapolymorpha HPODL_02118 I 0.000
OIDMADRAFT_194382 Oidiodendron maius OIDMADRAFT_194382 I 0.000
PABG_04211 Paracoccidioides brasiliensis PABG_04211 I 0.000
PAAG_11867 Paracoccidioides sp lutzii PAAG_11867 I 0.000
Pc18g00190 Penicillium chrysogenum Pc18g00190 I 0.000
PDIP_75510 Penicillium digitatum PDIP_75510 I 0.000
PEX1_077160 Penicillium expansum PEX1_077160 I 0.000
PITC_036250 Penicillium italicum PITC_036250 I 0.000
PMAA_076490 Penicillium marneffei PMAA_076490 I 0.000
PDE_04931 Penicillium oxalicum PDE_04931 I 0.000
PCH_Pc18g00190 Penicillium rubens PCH_Pc18g00190 I 0.000
U727_00433932271 Penicillium solitum U727_00433932271 I 0.000
SNOG_10542 Phaeosphaeria nodorum SNOG_10542 I 0.000
JL09_g4323 Pichia kudriavzevii JL09_g4323 I 0.000
estExt_fgenesh1_pm.C_chr_5.10316 Pichia stipitis estExt_fgenesh1_pm.C_chr_5.10316 I 0.000
GMDG_01589 Pseudogymnoascus destructans GMDG_01589 I 0.000
PTRG_09990 Pyrenophora triticirepentis PTRG_09990 I 0.000
Z518_06261 Rhinocladiella mackenziei Z518_06261 I 0.000
SU7_2475 Saccharomyces arboricola SU7_2475 I 0.000
SU7_2763 Saccharomyces arboricola SU7_2763 I 0.000
5532_YDR451C Saccharomyces bayanus 5532_YDR451C I 0.000
YHP1 Saccharomyces cerevisiae YDR451C D 0.000
YOX1 Saccharomyces cerevisiae YML027W D 0.000
SKUD_123402 Saccharomyces kudriavzevii SKUD_123402 I 0.000
5231_YDR451C Saccharomyces mikatae 5231_YDR451C I 0.000
17440_YML027W Saccharomyces paradoxus 17440_YML027W I 0.000
5594_YDR451C Saccharomyces paradoxus 5594_YDR451C I 0.000
PICST_65833 Scheffersomyces stipitis PICST_65833 I 0.000
SBOR_0341 Sclerotinia borealis SBOR_0341 I 0.000
SS1G_04522 Sclerotinia sclerotiorum SS1G_04522 I 0.000
SETTUDRAFT_126230 Setosphaeria turcica SETTUDRAFT_126230 I 0.000
SPAPADRAFT_57590 Spathaspora passalidarum SPAPADRAFT_57590 I 0.000
SEPMUDRAFT_122411 Sphaerulina musiva SEPMUDRAFT_122411 I 0.000
SPPG_01429 Spizellomyces punctatus SPPG_01429 I 0.000
SNOG_10542 Stagonospora nodorum SNOG_10542 I 0.000
PMAA_076490 Talaromyces marneffei PMAA_076490 I 0.000
TSTA_096850 Talaromyces stipitatus TSTA_096850 I 0.000
TBLA_0E02960 Tetrapisispora blattae TBLA_0E02960 I 0.000
TDEL_0A04320 Torulaspora delbrueckii TDEL_0A04320 I 0.000
TEQG_06412 Trichophyton equinum TEQG_06412 I 0.000
H101_06850 Trichophyton interdigitale H101_06850 I 0.000
H102_08770 Trichophyton rubrum H102_08770 I 0.000
H105_08795 Trichophyton soudanense H105_08795 I 0.000
TESG_00798 Trichophyton tonsurans TESG_00798 I 0.000
GSTUM_00011138001 Tuber melanosporum GSTUM_00011138001 I 0.000
M407DRAFT_21315 Tulasnella calospora M407DRAFT_21315 I 0.000
UREG_04594 Uncinocarpus reesii UREG_04594 I 0.000
UV8b_5567 Ustilaginoidea virens UV8b_5567 I 0.000
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I 0.000
Kpol_1023p80 Vanderwaltozyma polyspora Kpol_1023p80 I 0.000
PV09_05311 Verruconis gallopava PV09_05311 I 0.000
J056_000182 Wallemia ichthyophaga J056_000182 I 0.000
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I 0.000
YALI0_E20449g Yarrowia lipolytica YALI0_E20449g I 0.000
ZBAI_03698 Zygosaccharomyces bailii ZBAI_03698 I 0.000
ZBAI_09382 Zygosaccharomyces bailii ZBAI_09382 I 0.000
ZYRO0D13596g Zygosaccharomyces rouxii ZYRO0D13596g I 0.000