Pvit_14760 (Pogona vitticeps)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pvit_14760 T226801_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.866 0.982
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.866 0.982
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.866 0.982
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.866 0.982
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.866 0.982
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.866 0.982
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.814 0.912
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.814 0.912
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.814 0.912
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.781 0.895
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_14760 Homeodomain 113 172

Links

Other Homeodomain family TFs
Other Pogona vitticeps TFs

379 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.000
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.000
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.000
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.000
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.000
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.000
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.000
hmgb2a Danio rerio ENSDARG00000029722 N 0.000
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.000
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.000
D915_00818 Fasciola hepatica D915_00818 N 0.000
HelroG157726 Helobdella robusta HelroG157726 N 0.000
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.000
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.000
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.000
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.000
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.000
ENSMODG00000004606 Monodelphis domestica ENSMODG00000004606 N 0.000
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.000
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.000
ENSMLUG00000028530 Myotis lucifugus ENSMLUG00000028530 N 0.000
T265_12733 Opisthorchis viverrini T265_12733 N 0.000
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.000
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.000
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.000
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.000
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.000
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N 0.000
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.000
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.000
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.000
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.000
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.000
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.000
Smp_000980 Schistosoma mansoni Smp_000980 N 0.000
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.000
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.000
SMU15013231 Schmidtea mediterranea SMU15013231 N 0.000
SMU15024564 Schmidtea mediterranea SMU15024564 N 0.000
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.000
SMU15030340 Schmidtea mediterranea SMU15030340 N 0.000
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.000
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.000
TsM_000115400 Taenia solium TsM_000115400 N 0.000
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.000
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N 0.000