synt_with_mycgr.18__17 (Mycosphaerella fijiensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 synt_with_mycgr.18__17 T227766_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU09556
M02226_2.00 		Neurospora crassa
TTAATWTA
TAWATTAA		 PBM
Weirauch et al.(2014)
pTH8955 		0.824 0.877
Q0UJ27_PHANO_CONSTRUCT
M02202_2.00 		PBM CONSTRUCTS
NYAATHWNN
NNWDATTRN		 PBM
Weirauch et al.(2014)
pTH6773 		0.777 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
synt_with_mycgr.18__17 Homeodomain 167 224

Links

Other Homeodomain family TFs
Other Mycosphaerella fijiensis TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_26965 Aegilops tauschii F775_26965 I
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I
Aquca_002_00663 Aquilegia coerulea Aquca_002_00663 I
NAP Arabidopsis lyrata fgenesh2_kg.2__1206__AT1G69490.1 I
NAC029 Arabidopsis thaliana AT1G69490 D
Bostr.10273s0418 Boechera stricta Bostr.10273s0418 I
Bo6g095510 Brassica oleracea Bo6g095510 I
Bo6g108930 Brassica oleracea Bo6g108930 I
Bra004385 Brassica rapa Bra004385 I
PK25119.1 Cannabis sativa PK25119.1 I
Cagra.0887s0008 Capsella grandiflora Cagra.0887s0008 I
Carubv10020776m.g Capsella rubella Carubv10020776m.g I
evm.TU.supercontig_1.48 Carica papaya evm.TU.supercontig_1.48 I
Ca_16379 Cicer arietinum Ca_16379 I
Ca_18090 Cicer arietinum Ca_18090 I
Cla010367 Citrullus lanatus Cla010367 I
Ciclev10032304m.g Citrus clementina Ciclev10032304m.g I
orange1.1g023197m.g Citrus sinensis orange1.1g023197m.g I
Cucsa.284890 Cucumis sativus Cucsa.284890 I
Eucgr.B03208 Eucalyptus grandis Eucgr.B03208 I
Eucgr.G02486 Eucalyptus grandis Eucgr.G02486 I
Thhalv10018997m.g Eutrema salsugineum Thhalv10018997m.g I
GLYMA01G06150 Glycine max GLYMA01G06150 I
GLYMA20G04400 Glycine max GLYMA20G04400 I
GLYMA07G35630 Glycine max GLYMA07G35630 I
GLYMA02G12220 Glycine max GLYMA02G12220 I
Gorai.005G142300 Gossypium raimondii Gorai.005G142300 I
Gorai.008G179900 Gossypium raimondii Gorai.008G179900 I
MLOC_4747 Hordeum vulgare MLOC_4747 I
Lus10026617.g Linum usitatissimum Lus10026617.g I
Lus10030446.g Linum usitatissimum Lus10030446.g I
Lus10036773.g Linum usitatissimum Lus10036773.g I
Lus10037156.g Linum usitatissimum Lus10037156.g I
chr2.CM0641.320.nc Lotus japonicus chr2.CM0641.320.nc I
MDP0000262990 Malus domestica MDP0000262990 I
MDP0000481448 Malus domestica MDP0000481448 I
cassava1317.valid.m1 Manihot esculenta cassava1317.valid.m1 I
MTR_5g041940 Medicago truncatula MTR_5g041940 I
MTR_4g081870 Medicago truncatula MTR_4g081870 I
mgf022118m Mimulus guttatus mgf022118m I
mgf016848m Mimulus guttatus mgf016848m I
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I
OB11G11210 Oryza brachyantha OB11G11210 I
OB12G11500 Oryza brachyantha OB12G11500 I
OPUNC11G01330 Oryza punctata OPUNC11G01330 I
OPUNC12G01370 Oryza punctata OPUNC12G01370 I
Pavir.J23516 Panicum virgatum Pavir.J23516 I
POPTR_0008s08850 Populus trichocarpa POPTR_0008s08850 I
POPTR_0010s17350 Populus trichocarpa POPTR_0010s17350 I
Pm006470 Prunus mume Pm006470 I
PRUPE_ppa009530mg Prunus persica PRUPE_ppa009530mg I
29813.m001519 Ricinus communis 29813.m001519 I
SapurV1A.0063s0610 Salix purpurea SapurV1A.0063s0610 I
SapurV1A.0063s0620 Salix purpurea SapurV1A.0063s0620 I
SapurV1A.0801s0090 Salix purpurea SapurV1A.0801s0090 I
Si010410m.g Setaria italica Si010410m.g I
Si026530m.g Setaria italica Si026530m.g I
Si032676m.g Setaria italica Si032676m.g I
Solyc04g005610.2 Solanum lycopersicum Solyc04g005610.2 I
Solyc05g007770.2 Solanum lycopersicum Solyc05g007770.2 I
PGSC0003DMG400018435 Solanum tuberosum PGSC0003DMG400018435 I
PGSC0003DMG400002824 Solanum tuberosum PGSC0003DMG400002824 I
Sb08g001940 Sorghum bicolor Sb08g001940 I
Sb05g001580 Sorghum bicolor Sb05g001580 I
Traes_5BL_CC18CAD72 Triticum aestivum Traes_5BL_CC18CAD72 D
NAP Vitis vinifera VIT_01s0026g02710 I