CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
chr1.CM0442.170.nd
(
Lotus japonicus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
chr1.CM0442.170.nd
T230803_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr1.CM0442.170.nd
Homeodomain
257
309
AQKRLKKAHVDTLERVYRRSKRPTNTMISSIVHVTNIPRRKVVKWFEDKRAED
Links
Other
Homeodomain
family TFs
Other
Lotus japonicus
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB46219
Apis mellifera
GB46219
I
ACEP26731
Atta cephalotes
ACEP26731
I
Cflo_03557--XP_001122257.1_APIME
Camponotus floridanus
Cflo_03557--XP_001122257.1_APIME
I
CGI_10005528
Crassostrea gigas
CGI_10005528
I
YQE_01172
Dendroctonus ponderosae
YQE_01172
I
YQE_01224
Dendroctonus ponderosae
YQE_01224
I
YQE_09709
Dendroctonus ponderosae
YQE_09709
I
GF12658
Drosophila ananassae
FBgn0089694
I
GG22289
Drosophila erecta
FBgn0114461
I
GH21058
Drosophila grimshawi
FBgn0128520
I
CG7786
Drosophila melanogaster
FBgn0034096
D
GI18660
Drosophila mojavensis
FBgn0141399
I
GL11555
Drosophila persimilis
FBgn0149164
I
GA20586
Drosophila pseudoobscura
FBgn0080580
I
GM20077
Drosophila sechellia
FBgn0174960
I
GD15226
Drosophila simulans
FBgn0186896
I
GJ21676
Drosophila virilis
FBgn0208795
I
GK20980
Drosophila willistoni
FBgn0222972
I
HHAL005759-PA
Halyomorpha halys
HHAL005759-PA
I
Hsal_03262--XP_001122257.1_APIME
Harpegnathos saltator
Hsal_03262--XP_001122257.1_APIME
I
LotgiG115895
Lottia gigantea
LotgiG115895
I
LCUP016468
Lucilia cuprina
LCUP016468
I
MESCA008551
Megaselia scalaris
MESCA008551
I
MDOA005650
Musca domestica
MDOA005650
I
NV12599
Nasonia vitripennis
NV12599
I
PHUM361070
Pediculus humanus
PHUM361070
I
PPAI008653
Phlebotomus papatasi
PPAI008653
I
Sakowv30010676m.g
Saccoglossus kowalevskii
Sakowv30010676m.g
I
SMAR012395
Strigamia maritima
SMAR012395
I
SPU_004843
Strongylocentrotus purpuratus
SPU_004843
I
SPU_004842
Strongylocentrotus purpuratus
SPU_004842
I
TC004495
Tribolium castaneum
TC004495
I
L798_00093
Zootermopsis nevadensis
L798_00093
I