CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pc18g00190
(
Penicillium chrysogenum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Pc18g00190
T230986_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN
NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.857
0.877
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR
YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.618
0.421
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR
YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.618
0.421
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.618
0.421
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.618
0.421
NCU03266
M02224_2.00
Neurospora crassa
NNBWWAKDRN
NYHMTWWVNN
PBM
Weirauch et al.(2014)
pTH8814
0.605
0.719
FGRRES_01100
M02131_2.00
Fusarium graminearum
WTTAATTR
YAATTAAW
PBM
Weirauch et al.(2014)
pTH5438
0.604
0.667
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc18g00190.t1
Homeodomain
51
107
RQKRRRTSPEDHAVLESEYQQNSKPDKAARTSIVNRVSLGEKEVQIWFQNRRQNDRR
Links
Other
Homeodomain
family TFs
Other
Penicillium chrysogenum
TFs
166 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_069570
Acremonium chrysogenum
ACRE_069570
I
0.609
AB00260.1
Alternaria brassicicola
AB00260.1
I
0.782
AOL_s00075g18
Arthrobotrys oligospora
AOL_s00075g18
I
0.655
AGOS_AER314W
Ashbya gossypii
AGOS_AER314W
I
0.612
fgenesh1_pm.00866_#_491
Aspergillus carbonarius
fgenesh1_pm.00866_#_491
I
0.862
ACLA_040020
Aspergillus clavatus
CADACLAG00003199
I
0.857
CADAFLAG00002414
Aspergillus flavus
CADAFLAG00002414
I
0.857
CADANGAG00002342
Aspergillus niger
CADANGAG00002342
I
0.857
CADAORAG00001369
Aspergillus oryzae
CADAORAG00001369
I
0.857
EURHEDRAFT_516147
Aspergillus ruber
EURHEDRAFT_516147
I
0.857
ATEG_04171
Aspergillus terreus
CADATEAG00009984
D
0.857
M437DRAFT_82573
Aureobasidium melanogenum
M437DRAFT_82573
I
0.740
M438DRAFT_345498
Aureobasidium pullulans
M438DRAFT_345498
I
0.740
AUEXF2481DRAFT_40998
Aureobasidium subglaciale
AUEXF2481DRAFT_40998
I
0.740
BBA_00148
Beauveria bassiana
BBA_00148
I
0.604
COCC4DRAFT_127765
Bipolaris maydis
COCC4DRAFT_127765
I
0.782
COCMIDRAFT_2266
Bipolaris oryzae
COCMIDRAFT_2266
I
0.782
COCSADRAFT_125307
Bipolaris sorokiniana
COCSADRAFT_125307
I
0.782
COCVIDRAFT_88516
Bipolaris victoriae
COCVIDRAFT_88516
I
0.782
COCCADRAFT_90442
Bipolaris zeicola
COCCADRAFT_90442
I
0.782
BDDG_04023
Blastomyces dermatitidis
BDDG_04023
I
0.789
PVAR5_3236
Byssochlamys spectabilis
PVAR5_3236
I
0.859
CaO19.7017
Candida albicans
CaO19.7017
I
0.613
CD36_70900
Candida dubliniensis
CD36_70900
I
0.613
CAGL0G07249g
Candida glabrata
CAGL0G07249g
I
0.618
PGUG_00382
Candida guilliermondii
PGUG_00382
I
0.620
CLUG_04271
Candida lusitaniae
CLUG_04271
I
0.642
G210_2310
Candida maltosa
G210_2310
I
0.617
CORT_0H00310
Candida orthopsilosis
CORT_0H00310
I
0.616
CPAG_00635
Candida parapsilosis
CPAG_00635
I
0.616
CANTEDRAFT_113041
Candida tenuis
CANTEDRAFT_113041
I
0.616
CTRG_04888
Candida tropicalis
CTRG_04888
I
0.613
A1O1_06861
Capronia coronata
A1O1_06861
I
0.784
A1O3_10315
Capronia epimyces
A1O3_10315
I
0.784
PV04_10601
Capronia semiimmersa
PV04_10601
I
0.798
Z519_06193
Cladophialophora bantiana
Z519_06193
I
0.756
G647_08323
Cladophialophora carrionii
G647_08323
I
0.786
PV07_12240
Cladophialophora immunda
PV07_12240
I
0.613
A1O5_07631
Cladophialophora psammophila
A1O5_07631
I
0.756
A1O7_09958
Cladophialophora yegresii
A1O7_09958
I
0.786
CPUR_03335
Claviceps purpurea
CPUR_03335
I
0.604
CLUG_04271
Clavispora lusitaniae
CLUG_04271
I
0.642
CIMG_09634
Coccidioides immitis
CIMG_09634
I
0.784
CPC735_023880
Coccidioides posadasii
CPC735_023880
I
0.784
estExt_Genewise1.C_11468
Cochliobolus heterostrophus C5
estExt_Genewise1.C_11468
I
0.782
CFIO01_01433
Colletotrichum fioriniae
CFIO01_01433
I
0.604
CGGC5_5664
Colletotrichum gloeosporioides
CGGC5_5664
I
0.604
GLRG_04370
Colletotrichum graminicola
GLRG_04370
I
0.604
CH063_05074
Colletotrichum higginsianum
CH063_05074
I
0.604
Cob_03876
Colletotrichum orbiculare
Cob_03876
I
0.604
CSUB01_02498
Colletotrichum sublineola
CSUB01_02498
I
0.604
CCM_06184
Cordyceps militaris
CCM_06184
I
0.604
fgenesh1_pm.C_scaffold_5000435
Cryphonectria parasitica
fgenesh1_pm.C_scaffold_5000435
I
0.605
HMPREF1541_02811
Cyphellophora europaea
HMPREF1541_02811
I
0.640
H072_1197
Dactylellina haptotyla
H072_1197
I
0.655
DEHA2F22286g
Debaryomyces hansenii
DEHA2F22286g
I
0.613
DOTSEDRAFT_142040
Dothistroma septosporum
DOTSEDRAFT_142040
I
0.719
DRE_07453
Drechslerella stenobrocha
DRE_07453
I
0.679
EPUS_07220
Endocarpon pusillum
EPUS_07220
I
0.850
Ecym_4103
Eremothecium cymbalariae
Ecym_4103
I
0.608
A1O9_06349
Exophiala aquamarina
A1O9_06349
I
0.731
HMPREF1120_01778
Exophiala dermatitidis
HMPREF1120_01778
I
0.784
PV10_01019
Exophiala mesophila
PV10_01019
I
0.637
PV06_07195
Exophiala oligosperma
PV06_07195
I
0.618
PV11_06012
Exophiala sideris
PV11_06012
I
0.625
PV08_06661
Exophiala spinifera
PV08_06661
I
0.618
PV05_02773
Exophiala xenobiotica
PV05_02773
I
0.625
Z517_12283
Fonsecaea pedrosoi
Z517_12283
I
0.751
FFUJ_01281
Fusarium fujikuroi
FFUJ_01281
I
0.604
FGRRES_01100
Fusarium graminearum
FGRRES_01100
D
0.604
FOXG_00297
Fusarium oxysporum
FOXG_00297
I
0.604
FPSE_09056
Fusarium pseudograminearum
FPSE_09056
I
0.604
NechaG98757
Fusarium solani
NechaG98757
I
0.604
FVEG_01221
Fusarium verticillioides
FVEG_01221
I
0.604
HCBG_03004
Histoplasma capsulatum
HCBG_03004
I
0.799
KAFR_0C05600
Kazachstania africana
KAFR_0C05600
I
0.630
KNAG_0B03460
Kazachstania naganishii
KNAG_0B03460
I
0.620
KLLA0_B01584g
Kluyveromyces lactis
KLLA0_B01584g
I
0.645
KLTH0G04686g
Kluyveromyces thermotolerans
KLTH0G04686g
I
0.630
Kwal_18450
Kluyveromyces waltii
Kwal_18450
I
0.630
KUCA_T00000773001
Kuraishia capsulata
KUCA_T00000773001
I
0.658
SAKL0G05896g
Lachancea kluyveri
SAKL0G05896g
I
0.615
LALA0_S09e00364g
Lachancea lanzarotensis
LALA0_S09e00364g
I
0.620
KLTH0G04686g
Lachancea thermotolerans
KLTH0G04686g
I
0.630
LEMA_P079180.1
Leptosphaeria maculans
LEMA_P079180.1
I
0.782
LELG_05443
Lodderomyces elongisporus
LELG_05443
I
0.611
MPH_01872
Macrophomina phaseolina
MPH_01872
I
0.793
MGG_11712
Magnaporthe oryzae
MGG_11712
I
0.602
MAC_05257
Metarhizium acridum
MAC_05257
I
0.604
MAM_06825
Metarhizium album
MAM_06825
I
0.604
MANI_109748
Metarhizium anisopliae
MANI_109748
I
0.604
MBR_03692
Metarhizium brunneum
MBR_03692
I
0.604
MGU_04884
Metarhizium guizhouense
MGU_04884
I
0.604
MAJ_02218
Metarhizium majus
MAJ_02218
I
0.604
X797_003774
Metarhizium robertsii
X797_003774
I
0.604
PGUG_00382
Meyerozyma guilliermondii
PGUG_00382
I
0.620
MCYG_03024
Microsporum canis
MCYG_03024
I
0.828
MGYG_00197
Microsporum gypseum
MGYG_00197
I
0.828
GNLVRS01_PISO0M03048g
Millerozyma farinosa
GNLVRS01_PISO0M03048g
I
0.607
GNLVRS01_PISO0N03203g
Millerozyma farinosa
GNLVRS01_PISO0N03203g
I
0.607
NCAS_0H02770
Naumovozyma castellii
NCAS_0H02770
I
0.616
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273
I
0.604
NCU03266
Neurospora crassa
NCU03266
D
0.605
estExt_fgenesh3_pm.C_70282
Neurospora discreta
estExt_fgenesh3_pm.C_70282
I
0.605
NEUTE1DRAFT_133183
Neurospora tetrasperma
NEUTE1DRAFT_133183
I
0.605
HPODL_02118
Ogataea parapolymorpha
HPODL_02118
I
0.612
PABG_04211
Paracoccidioides brasiliensis
PABG_04211
I
0.799
PAAG_11867
Paracoccidioides sp lutzii
PAAG_11867
I
0.799
PDIP_75510
Penicillium digitatum
PDIP_75510
I
0.867
PEX1_077160
Penicillium expansum
PEX1_077160
I
0.862
PITC_036250
Penicillium italicum
PITC_036250
I
0.862
PMAA_076490
Penicillium marneffei
PMAA_076490
I
0.845
PDE_04931
Penicillium oxalicum
PDE_04931
I
0.857
PCH_Pc18g00190
Penicillium rubens
PCH_Pc18g00190
I
0.867
U727_00433932271
Penicillium solitum
U727_00433932271
I
0.862
PFICI_01897
Pestalotiopsis fici
PFICI_01897
I
0.601
SNOG_10542
Phaeosphaeria nodorum
SNOG_10542
I
0.783
JL09_g4323
Pichia kudriavzevii
JL09_g4323
I
0.639
estExt_fgenesh1_pm.C_chr_5.10316
Pichia stipitis
estExt_fgenesh1_pm.C_chr_5.10316
I
0.616
PODANS_1_2230
Podospora anserina
PODANS_1_2230
I
0.605
GMDG_01589
Pseudogymnoascus destructans
GMDG_01589
I
0.782
V499_00333
Pseudogymnoascus pannorum
V499_00333
I
0.782
Z518_06261
Rhinocladiella mackenziei
Z518_06261
I
0.784
SU7_2475
Saccharomyces arboricola
SU7_2475
I
0.618
Scas_Contig641.12
Saccharomyces castellii
Scas_Contig641.12
I
0.616
YOX1
Saccharomyces cerevisiae
YML027W
D
0.618
17440_YML027W
Saccharomyces paradoxus
17440_YML027W
I
0.618
AACERI_AaceriAER314W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAER314W
I
0.612
PICST_65833
Scheffersomyces stipitis
PICST_65833
I
0.616
SETTUDRAFT_126230
Setosphaeria turcica
SETTUDRAFT_126230
I
0.782
SMAC_02983
Sordaria macrospora
SMAC_02983
I
0.605
SPAPADRAFT_57590
Spathaspora passalidarum
SPAPADRAFT_57590
I
0.612
SPBR_06725
Sporothrix brasiliensis
SPBR_06725
I
0.604
HMPREF1624_00506
Sporothrix schenckii
HMPREF1624_00506
I
0.604
S40288_08800
Stachybotrys chartarum
S40288_08800
I
0.604
S40285_01877
Stachybotrys chlorohalonata
S40285_01877
I
0.604
SNOG_10542
Stagonospora nodorum
SNOG_10542
I
0.783
PMAA_076490
Talaromyces marneffei
PMAA_076490
I
0.845
TSTA_096850
Talaromyces stipitatus
TSTA_096850
I
0.857
TBLA_0E02960
Tetrapisispora blattae
TBLA_0E02960
I
0.619
TPHA_0D02630
Tetrapisispora phaffii
TPHA_0D02630
I
0.607
THITE_2131584
Thielavia terrestris
THITE_2131584
I
0.616
TDEL_0A04320
Torulaspora delbrueckii
TDEL_0A04320
I
0.630
TRIREDRAFT_57059
Trichoderma reesei
TRIREDRAFT_57059
I
0.604
TRIVIDRAFT_42882
Trichoderma virens
TRIVIDRAFT_42882
I
0.604
TEQG_06412
Trichophyton equinum
TEQG_06412
I
0.828
H101_06850
Trichophyton interdigitale
H101_06850
I
0.828
H102_08770
Trichophyton rubrum
H102_08770
I
0.828
H105_08795
Trichophyton soudanense
H105_08795
I
0.828
TESG_00798
Trichophyton tonsurans
TESG_00798
I
0.828
GSTUM_00011138001
Tuber melanosporum
GSTUM_00011138001
I
0.642
M407DRAFT_21315
Tulasnella calospora
M407DRAFT_21315
I
0.621
UREG_04594
Uncinocarpus reesii
UREG_04594
I
0.784
UV8b_5567
Ustilaginoidea virens
UV8b_5567
I
0.635
Kpol_1004p50
Vanderwaltozyma polyspora
Kpol_1004p50
I
0.640
Kpol_1023p80
Vanderwaltozyma polyspora
Kpol_1023p80
I
0.620
PV09_05311
Verruconis gallopava
PV09_05311
I
0.679
VDBG_05845
Verticillium albo atrum
VDBG_05845
I
0.605
VDBG_05845
Verticillium alfalfae
VDBG_05845
I
0.605
VDAG_03007
Verticillium dahliae
VDAG_03007
I
0.605
J056_000182
Wallemia ichthyophaga
J056_000182
I
0.627
BN7_6497
Wickerhamomyces ciferrii
BN7_6497
I
0.648
YALI0_E20449g
Yarrowia lipolytica
YALI0_E20449g
I
0.613
ZBAI_03698
Zygosaccharomyces bailii
ZBAI_03698
I
0.623
ZBAI_09382
Zygosaccharomyces bailii
ZBAI_09382
I
0.623
ZYRO0D13596g
Zygosaccharomyces rouxii
ZYRO0D13596g
I
0.623