BGLB009117 (Biomphalaria glabrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 BGLB009117 T232442_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.867 0.982
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.965
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.965
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.965
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.865 0.965
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.865 0.965
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.965
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.865 0.965
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.865 0.965
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.965
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.865 0.947
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.865 0.947
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.865 0.947
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.865 0.947
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.947
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB009117-PA Homeodomain 142 198

Links

Other Homeodomain family TFs
Other Biomphalaria glabrata TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M437DRAFT_69925 Aureobasidium melanogenum M437DRAFT_69925 I 0.000
M438DRAFT_354976 Aureobasidium pullulans M438DRAFT_354976 I 0.000
AUEXF2481DRAFT_6834 Aureobasidium subglaciale AUEXF2481DRAFT_6834 I 0.000
Bcin10g03530 Botrytis cinerea Bcin10g03530 I 0.000
CHGG_07320 Chaetomium globosum CHGG_07320 I 0.000
CTHT_0068120 Chaetomium thermophilum CTHT_0068120 N 0.000
CIMG_03081 Coccidioides immitis CIMG_03081 I 0.000
CPC735_010610 Coccidioides posadasii CPC735_010610 I 0.000
CFIO01_10341 Colletotrichum fioriniae CFIO01_10341 I 0.000
GLRG_01236 Colletotrichum graminicola GLRG_01236 I 0.000
CH063_14565 Colletotrichum higginsianum CH063_14565 I 0.000
Cob_10342 Colletotrichum orbiculare Cob_10342 I 0.000
CSUB01_07393 Colletotrichum sublineola CSUB01_07393 I 0.000
DOTSEDRAFT_69884 Dothistroma septosporum DOTSEDRAFT_69884 I 0.000
EV44_g3230 Erysiphe necator EV44_g3230 I 0.000
UCREL1_5463 Eutypa lata UCREL1_5463 N 0.000
FFUJ_12164 Fusarium fujikuroi FFUJ_12164 I 0.000
FGRRES_15897 Fusarium graminearum FGRRES_15897 I 0.000
FOXG_04283 Fusarium oxysporum FOXG_04283 I 0.000
FPSE_09978 Fusarium pseudograminearum FPSE_09978 I 0.000
NechaG72439 Fusarium solani NechaG72439 I 0.000
FVEG_07406 Fusarium verticillioides FVEG_07406 I 0.000
M7I_6116 Glarea lozoyensis M7I_6116 I 0.000
CMQ_6218 Grosmannia clavigera CMQ_6218 I 0.000
HCBG_01324 Histoplasma capsulatum HCBG_01324 I 0.000
MBM_00232 Marssonina brunnea MBM_00232 I 0.000
MANI_006126 Metarhizium anisopliae MANI_006126 I 0.000
MBR_08762 Metarhizium brunneum MBR_08762 I 0.000
MGU_09012 Metarhizium guizhouense MGU_09012 I 0.000
MAJ_03096 Metarhizium majus MAJ_03096 I 0.000
X797_003001 Metarhizium robertsii X797_003001 I 0.000
MYCTH_2302011 Myceliophthora thermophila MYCTH_2302011 I 0.000
estExt_Genewise1Plus.C_sca_14_chr10_3_00150 Nectria haematococca estExt_Genewise1Plus.C_sca_14_chr10_3_00150 I 0.000
tah-3 Neurospora crassa NCU03686 D 0.000
fgenesh2_pg.C_scaffold_1000308 Neurospora discreta fgenesh2_pg.C_scaffold_1000308 I 0.000
NEUTE1DRAFT_93932 Neurospora tetrasperma NEUTE1DRAFT_93932 I 0.000
OIDMADRAFT_38504 Oidiodendron maius OIDMADRAFT_38504 I 0.000
F503_07473 Ophiostoma piceae uamh F503_07473 I 0.000
PFICI_07802 Pestalotiopsis fici PFICI_07802 N 0.000
GMDG_03846 Pseudogymnoascus destructans GMDG_03846 N 0.000
V499_08420 Pseudogymnoascus pannorum V499_08420 N 0.000
SAPIO_CDS0532 Scedosporium apiospermum SAPIO_CDS0532 I 0.000
SBOR_2018 Sclerotinia borealis SBOR_2018 I 0.000
SS1G_07003 Sclerotinia sclerotiorum SS1G_07003 I 0.000
SPBR_06805 Sporothrix brasiliensis SPBR_06805 I 0.000
HMPREF1624_00610 Sporothrix schenckii HMPREF1624_00610 I 0.000
THITE_2108176 Thielavia terrestris THITE_2108176 I 0.000
TRIATDRAFT_133633 Trichoderma atroviride TRIATDRAFT_133633 I 0.000
TRIREDRAFT_22925 Trichoderma reesei TRIREDRAFT_22925 I 0.000
TRIVIDRAFT_90960 Trichoderma virens TRIVIDRAFT_90960 I 0.000
UREG_02875 Uncinocarpus reesii UREG_02875 I 0.000
VDBG_09426 Verticillium albo atrum VDBG_09426 I 0.000
VDBG_09426 Verticillium alfalfae VDBG_09426 I 0.000