BXY_0138900 (Bursaphelenchus xylophilus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 BXY_0138900 T233255_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.784 0.737
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.784 0.737
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.784 0.737
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.784 0.737
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.784 0.737
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.784 0.737
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.749 0.737
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.749 0.737
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.749 0.737
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.748 0.719
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.748 0.719
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.740 0.684
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.740 0.684
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.740 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BXY_0138900.1 Homeodomain 145 204

Links

Other Homeodomain family TFs
Other Bursaphelenchus xylophilus TFs

378 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05299 Aegilops tauschii F775_05299 N 0.000
AMTR_s00031p00017860 Amborella trichopoda AMTR_s00031p00017860 I 0.000
Aquca_004_00127 Aquilegia coerulea Aquca_004_00127 I 0.000
Aquca_004_00791 Aquilegia coerulea Aquca_004_00791 I 0.000
Aquca_009_00172 Aquilegia coerulea Aquca_009_00172 I 0.000
Aquca_009_00424 Aquilegia coerulea Aquca_009_00424 I 0.000
Aquca_072_00138 Aquilegia coerulea Aquca_072_00138 I 0.000
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I 0.000
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I 0.000
TGA6 Arabidopsis thaliana AT3G12250 D 0.000
TGA2 Arabidopsis thaliana AT5G06950 D 0.000
TGA5 Arabidopsis thaliana AT5G06960 D 0.000
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I 0.000
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I 0.000
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I 0.000
BRADI2G10830 Brachypodium distachyon BRADI2G10830 I 0.000
Bo1g139470 Brassica oleracea Bo1g139470 I 0.000
Bo2g007460 Brassica oleracea Bo2g007460 I 0.000
Bo3g064830 Brassica oleracea Bo3g064830 I 0.000
Bo5g133550 Brassica oleracea Bo5g133550 I 0.000
Bo9g175710 Brassica oleracea Bo9g175710 I 0.000
Bra001443 Brassica rapa Bra001443 I 0.000
Bra009241 Brassica rapa Bra009241 I 0.000
Bra028713 Brassica rapa Bra028713 I 0.000
Bra034767 Brassica rapa Bra034767 I 0.000
Bra038705 Brassica rapa Bra038705 I 0.000
PK07387.1 Cannabis sativa PK07387.1 I 0.000
PK09021.1 Cannabis sativa PK09021.1 D 0.000
PK13754.1 Cannabis sativa PK13754.1 I 0.000
PK21698.1 Cannabis sativa PK21698.1 I 0.000
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I 0.000
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I 0.000
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I 0.000
Carubv10001409m.g Capsella rubella Carubv10001409m.g I 0.000
Carubv10001413m.g Capsella rubella Carubv10001413m.g I 0.000
evm.TU.supercontig_1.202 Carica papaya evm.TU.supercontig_1.202 I 0.000
evm.TU.supercontig_32.14 Carica papaya evm.TU.supercontig_32.14 I 0.000
evm.TU.supercontig_5.165 Carica papaya evm.TU.supercontig_5.165 I 0.000
evm.TU.supercontig_847.1 Carica papaya evm.TU.supercontig_847.1 I 0.000
evm.TU.supercontig_85.93 Carica papaya evm.TU.supercontig_85.93 I 0.000
Ca_07057 Cicer arietinum Ca_07057 I 0.000
Ca_07170 Cicer arietinum Ca_07170 I 0.000
Ca_10901 Cicer arietinum Ca_10901 I 0.000
Ca_16486 Cicer arietinum Ca_16486 N 0.000
Ca_17971 Cicer arietinum Ca_17971 I 0.000
Cla002918 Citrullus lanatus Cla002918 I 0.000
Cla008794 Citrullus lanatus Cla008794 I 0.000
Cla010092 Citrullus lanatus Cla010092 I 0.000
Cla017796 Citrullus lanatus Cla017796 I 0.000
Cla022393 Citrullus lanatus Cla022393 I 0.000
Ciclev10001081m.g Citrus clementina Ciclev10001081m.g I 0.000
Ciclev10005080m.g Citrus clementina Ciclev10005080m.g I 0.000
Ciclev10031361m.g Citrus clementina Ciclev10031361m.g I 0.000
orange1.1g015258m.g Citrus sinensis orange1.1g015258m.g I 0.000
orange1.1g038233m.g Citrus sinensis orange1.1g038233m.g I 0.000
orange1.1g045786m.g Citrus sinensis orange1.1g045786m.g I 0.000
Cucsa.005120 Cucumis sativus Cucsa.005120 I 0.000
Cucsa.199800 Cucumis sativus Cucsa.199800 I 0.000
Cucsa.242870 Cucumis sativus Cucsa.242870 I 0.000
Cucsa.307820 Cucumis sativus Cucsa.307820 I 0.000
Cucsa.337740 Cucumis sativus Cucsa.337740 I 0.000
Cucsa.365420 Cucumis sativus Cucsa.365420 N 0.000
Cucsa.385130 Cucumis sativus Cucsa.385130 N 0.000
Eucgr.A02240 Eucalyptus grandis Eucgr.A02240 I 0.000
Eucgr.B03855 Eucalyptus grandis Eucgr.B03855 I 0.000
Eucgr.G03217 Eucalyptus grandis Eucgr.G03217 I 0.000
Eucgr.J00491 Eucalyptus grandis Eucgr.J00491 I 0.000
Eucgr.K01643 Eucalyptus grandis Eucgr.K01643 I 0.000
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I 0.000
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I 0.000
gene00517-v1.0-hybrid Fragaria vesca gene00517-v1.0-hybrid I 0.000
gene21797-v1.0-hybrid Fragaria vesca gene21797-v1.0-hybrid I 0.000
gene21882-v1.0-hybrid Fragaria vesca gene21882-v1.0-hybrid I 0.000
GLYMA03G28320 Glycine max GLYMA03G28320 I 0.000
GLYMA11G19026 Glycine max GLYMA11G19026 I 0.000
GLYMA12G09430 Glycine max GLYMA12G09430 I 0.000
GLYMA13G26280 Glycine max GLYMA13G26280 I 0.000
GLYMA15G37220 Glycine max GLYMA15G37220 I 0.000
GLYMA19G31050 Glycine max GLYMA19G31050 I 0.000
GLYMA20G39050 Glycine max GLYMA20G39050 I 0.000
Gorai.001G122100 Gossypium raimondii Gorai.001G122100 I 0.000
Gorai.002G228200 Gossypium raimondii Gorai.002G228200 I 0.000
Gorai.006G111800 Gossypium raimondii Gorai.006G111800 I 0.000
Gorai.006G141000 Gossypium raimondii Gorai.006G141000 I 0.000
Gorai.007G352600 Gossypium raimondii Gorai.007G352600 I 0.000
Gorai.008G185000 Gossypium raimondii Gorai.008G185000 I 0.000
Gorai.009G086200 Gossypium raimondii Gorai.009G086200 N 0.000
Gorai.011G217200 Gossypium raimondii Gorai.011G217200 I 0.000
Gorai.013G001700 Gossypium raimondii Gorai.013G001700 I 0.000
Gorai.013G081100 Gossypium raimondii Gorai.013G081100 I 0.000
MLOC_17690 Hordeum vulgare MLOC_17690 N 0.000
LPERR01G10700 Leersia perrieri LPERR01G10700 I 0.000
Lus10008658.g Linum usitatissimum Lus10008658.g I 0.000
Lus10024140.g Linum usitatissimum Lus10024140.g I 0.000
Lus10026166.g Linum usitatissimum Lus10026166.g I 0.000
Lus10034296.g Linum usitatissimum Lus10034296.g I 0.000
Lus10041475.g Linum usitatissimum Lus10041475.g I 0.000
chr1.CM0009.80.nd Lotus japonicus chr1.CM0009.80.nd I 0.000
MDP0000262210 Malus domestica MDP0000262210 I 0.000
MDP0000300532 Malus domestica MDP0000300532 I 0.000
MDP0000307943 Malus domestica MDP0000307943 I 0.000
MDP0000320322 Malus domestica MDP0000320322 I 0.000
MDP0000320524 Malus domestica MDP0000320524 I 0.000
MDP0000536881 Malus domestica MDP0000536881 I 0.000
cassava13378.valid.m1 Manihot esculenta cassava13378.valid.m1 I 0.000
cassava13449.valid.m1 Manihot esculenta cassava13449.valid.m1 N 0.000
cassava1426.valid.m1 Manihot esculenta cassava1426.valid.m1 I 0.000
cassava1427.valid.m1 Manihot esculenta cassava1427.valid.m1 I 0.000
cassava22236.valid.m1 Manihot esculenta cassava22236.valid.m1 I 0.000
cassava22237.valid.m1 Manihot esculenta cassava22237.valid.m1 I 0.000
cassava6928.valid.m1 Manihot esculenta cassava6928.valid.m1 I 0.000
MTR_2g086420 Medicago truncatula MTR_2g086420 I 0.000
MTR_4g053250 Medicago truncatula MTR_4g053250 I 0.000
MTR_7g089800 Medicago truncatula MTR_7g089800 I 0.000
MTR_8g040120 Medicago truncatula MTR_8g040120 I 0.000
mgf001395m Mimulus guttatus mgf001395m I 0.000
mgf005858m Mimulus guttatus mgf005858m I 0.000
mgf016030m Mimulus guttatus mgf016030m N 0.000
mgf025345m Mimulus guttatus mgf025345m I 0.000
GSMUA_Achr10G00340_001 Musa acuminata GSMUA_Achr10G00340_001 I 0.000
GSMUA_Achr10G10300_001 Musa acuminata GSMUA_Achr10G10300_001 N 0.000
GSMUA_Achr11G25140_001 Musa acuminata GSMUA_Achr11G25140_001 I 0.000
GSMUA_Achr11G26170_001 Musa acuminata GSMUA_Achr11G26170_001 N 0.000
GSMUA_Achr2G06770_001 Musa acuminata GSMUA_Achr2G06770_001 I 0.000
GSMUA_Achr3G11150_001 Musa acuminata GSMUA_Achr3G11150_001 I 0.000
GSMUA_Achr3G25020_001 Musa acuminata GSMUA_Achr3G25020_001 I 0.000
GSMUA_Achr8G05800_001 Musa acuminata GSMUA_Achr8G05800_001 I 0.000
GSMUA_Achr8G21670_001 Musa acuminata GSMUA_Achr8G21670_001 I 0.000
OBART01G11380 Oryza barthii OBART01G11380 I 0.000
OBART01G34430 Oryza barthii OBART01G34430 I 0.000
OB01G21470 Oryza brachyantha OB01G21470 I 0.000
OB01G43330 Oryza brachyantha OB01G43330 I 0.000
OGLUM01G20660 Oryza glumaepatula OGLUM01G20660 I 0.000
BGIOSGA000624 Oryza indica BGIOSGA000624 I 0.000
BGIOSGA003265 Oryza indica BGIOSGA003265 I 0.000
OLONG_020675 Oryza longistaminata OLONG_020675 I 0.000
OMERI01G31730 Oryza meridionalis OMERI01G31730 I 0.000
ONIVA01G13810 Oryza nivara ONIVA01G13810 I 0.000
ONIVA01G39320 Oryza nivara ONIVA01G39320 I 0.000
OPUNC01G11270 Oryza punctata OPUNC01G11270 I 0.000
OPUNC01G33450 Oryza punctata OPUNC01G33450 I 0.000
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I 0.000
ORUFI01G37800 Oryza rufipogon ORUFI01G37800 I 0.000
TGA2.3 Oryza sativa OS01G0279900 I 0.000
OS01G0808100 Oryza sativa OS01G0808100 I 0.000
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I 0.000
Pavir.Eb03507 Panicum virgatum Pavir.Eb03507 I 0.000
PDK_20s1462851g003 Phoenix dactylifera PDK_20s1462851g003 I 0.000
POPTR_0001s06700 Populus trichocarpa POPTR_0001s06700 I 0.000
POPTR_0004s21360 Populus trichocarpa POPTR_0004s21360 I 0.000
POPTR_0006s03720 Populus trichocarpa POPTR_0006s03720 I 0.000
PAN Populus trichocarpa POPTR_0008s11710 I 0.000
POPTR_0009s16590 Populus trichocarpa POPTR_0009s16590 I 0.000
POPTR_0016s03590 Populus trichocarpa POPTR_0016s03590 I 0.000
Pm016643 Prunus mume Pm016643 I 0.000
Pm025995 Prunus mume Pm025995 I 0.000
Pm028917 Prunus mume Pm028917 I 0.000
PRUPE_ppa003825mg Prunus persica PRUPE_ppa003825mg I 0.000
PRUPE_ppa004537mg Prunus persica PRUPE_ppa004537mg I 0.000
PRUPE_ppa005279mg Prunus persica PRUPE_ppa005279mg I 0.000
29216.m000249 Ricinus communis 29216.m000249 I 0.000
30055.m001550 Ricinus communis 30055.m001550 I 0.000
30131.m007163 Ricinus communis 30131.m007163 I 0.000
SapurV1A.0018s0400 Salix purpurea SapurV1A.0018s0400 I 0.000
SapurV1A.0079s0330 Salix purpurea SapurV1A.0079s0330 I 0.000
SapurV1A.0125s0260 Salix purpurea SapurV1A.0125s0260 I 0.000
SapurV1A.0189s0240 Salix purpurea SapurV1A.0189s0240 I 0.000
SapurV1A.0196s0260 Salix purpurea SapurV1A.0196s0260 I 0.000
SapurV1A.0374s0050 Salix purpurea SapurV1A.0374s0050 I 0.000
SapurV1A.1761s0020 Salix purpurea SapurV1A.1761s0020 I 0.000
Si001292m.g Setaria italica Si001292m.g I 0.000
Si002195m.g Setaria italica Si002195m.g I 0.000
Solyc10g080770.1 Solanum lycopersicum Solyc10g080770.1 I 0.000
Solyc11g064950.1 Solanum lycopersicum Solyc11g064950.1 I 0.000
PGSC0003DMG400009449 Solanum tuberosum PGSC0003DMG400009449 I 0.000
PGSC0003DMG402023696 Solanum tuberosum PGSC0003DMG402023696 I 0.000
Sb03g006790 Sorghum bicolor Sb03g006790 I 0.000
Sb03g037560 Sorghum bicolor Sb03g037560 I 0.000
Sb04g006500 Sorghum bicolor Sb04g006500 I 0.000
TCM_011845 Theobroma cacao TCM_011845 I 0.000
TCM_023491 Theobroma cacao TCM_023491 I 0.000
TCM_023492 Theobroma cacao TCM_023492 I 0.000
TCM_024862 Theobroma cacao TCM_024862 I 0.000
TCM_041421 Theobroma cacao TCM_041421 I 0.000
HBP1B_WHEAT Triticum aestivum HBP1B_WHEAT D 0.000
TRAES3BF003000030CFD_g Triticum aestivum TRAES3BF003000030CFD_g I 0.000
Traes_4AL_5E7F93445 Triticum aestivum Traes_4AL_5E7F93445 N 0.000
Traes_4BS_B7A8F8CD8 Triticum aestivum Traes_4BS_B7A8F8CD8 N 0.000
Traes_4DS_0521C8ABF Triticum aestivum Traes_4DS_0521C8ABF N 0.000
PAN Vitis vinifera VIT_01s0011g03230 I 0.000
TGA9 Vitis vinifera VIT_06s0080g00360 I 0.000
VIT_08s0007g05170 Vitis vinifera VIT_08s0007g05170 I 0.000
TGA10 Vitis vinifera VIT_08s0007g06160 I 0.000
VIT_13s0084g00660 Vitis vinifera VIT_13s0084g00660 I 0.000
GRMZM2G019907 Zea mays GRMZM2G019907 I 0.000
GRMZM2G030280 Zea mays GRMZM2G030280 I 0.000
GRMZM2G125243 Zea mays GRMZM2G125243 I 0.000