EmuJ_000106600 (Echinococcus multilocularis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 EmuJ_000106600 T233880_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 0.947
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 0.947
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 0.947
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 0.947
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.930
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.930
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.930
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.930
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.930
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.930
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.930
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.930
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.930
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.930
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.930
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.930
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EmuJ_000106600 Homeodomain 148 204

Links

Other Homeodomain family TFs
Other Echinococcus multilocularis TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_23346 Aegilops tauschii F775_23346 N 0.000
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.000
WRKY38 Arabidopsis thaliana AT5G22570 D 0.000
BRADI4G44350 Brachypodium distachyon BRADI4G44350 I 0.000
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.000
Bra028918 Brassica rapa Bra028918 I 0.000
PK10616.1 Cannabis sativa PK10616.1 I 0.000
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.000
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.000
MLOC_68369 Hordeum vulgare MLOC_68369 N 0.000
LPERR12G01070 Leersia perrieri LPERR12G01070 I 0.000
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.000
LPERR08G11030 Leersia perrieri LPERR08G11030 I 0.000
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.000
OBART11G01100 Oryza barthii OBART11G01100 N 0.000
ORGLA12G0007500 Oryza glaberrima ORGLA12G0007500 N 0.000
ORGLA11G0201900 Oryza glaberrima ORGLA11G0201900 N 0.000
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.000
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.000
OGLUM12G01400 Oryza glumaepatula OGLUM12G01400 N 0.000
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.000
BGIOSGA036757 Oryza indica BGIOSGA036757 N 0.000
BGIOSGA034613 Oryza indica BGIOSGA034613 N 0.000
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.000
OMERI11G01520 Oryza meridionalis OMERI11G01520 N 0.000
ONIVA11G01230 Oryza nivara ONIVA11G01230 N 0.000
ONIVA11G01050 Oryza nivara ONIVA11G01050 N 0.000
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.000
OPUNC12G00970 Oryza punctata OPUNC12G00970 N 0.000
OPUNC11G00970 Oryza punctata OPUNC11G00970 N 0.000
OS12G0116600 Oryza sativa OS12G0116600 N 0.000
OS11G0117400 Oryza sativa OS11G0117400 N 0.000
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.000
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.000
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.000
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.000
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.000
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.000
Si027360m.g Setaria italica Si027360m.g N 0.000
Si025181m.g Setaria italica Si025181m.g I 0.000
Si019098m.g Setaria italica Si019098m.g N 0.000
Si010832m.g Setaria italica Si010832m.g N 0.000
Si010764m.g Setaria italica Si010764m.g N 0.000
Sb08g002570 Sorghum bicolor Sb08g002570 N 0.000
Sb05g001180 Sorghum bicolor Sb05g001180 N 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000
Traes_5DL_09F1F8F79 Triticum aestivum Traes_5DL_09F1F8F79 N 0.000
Traes_5BL_175E7FC38 Triticum aestivum Traes_5BL_175E7FC38 N 0.000
TRIUR3_24639 Triticum urartu TRIUR3_24639 N 0.000