TsM_000636600 (Taenia solium)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TsM_000636600 T237060_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.740 0.625
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.722 0.679
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.722 0.679
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.722 0.679
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.722 0.679
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.722 0.679
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.722 0.679
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.710 0.661
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.710 0.661
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.710 0.661
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.708 0.625
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.702 0.607
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.702 0.607
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.702 0.607
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TsM_000636600 Homeodomain 156 214

Links

Other Homeodomain family TFs
Other Taenia solium TFs

375 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010559 Ailuropoda melanoleuca ENSAMEG00000010559 I 0.000
ENSAPLG00000008769 Anas platyrhynchos ENSAPLG00000008769 I 0.000
Afo_R003471 Aptenodytes forsteri Afo_R003471 I 0.000
BGLB005801 Biomphalaria glabrata BGLB005801 I 0.000
ENSCJAG00000001029 Callithrix jacchus ENSCJAG00000001029 I 0.000
Aan_R001040 Calypte anna Aan_R001040 I 0.000
ENSCAFG00000002448 Canis familiaris ENSCAFG00000002448 I 0.000
CapteG145851 Capitella teleta CapteG145851 I 0.000
ENSCPOG00000005481 Cavia porcellus ENSCPOG00000005481 I 0.000
ENSCSAG00000013508 Chlorocebus sabaeus ENSCSAG00000013508 I 0.000
CGI_10012885 Crassostrea gigas CGI_10012885 I 0.000
ENSDNOG00000003198 Dasypus novemcinctus ENSDNOG00000003198 I 0.000
Ahr Dipodomys ordii ENSDORG00000007750 I 0.000
ENSETEG00000019660 Echinops telfairi ENSETEG00000019660 I 0.000
ENSGALG00000010836 Gallus gallus ENSGALG00000010836 I 0.000
ahr1b Gasterosteus aculeatus ENSGACG00000015615 I 0.000
Gfo_R002789 Geospiza fortis Gfo_R002789 I 0.000
ENSGGOG00000011367 Gorilla gorilla ENSGGOG00000011367 I 0.000
AHR Homo sapiens ENSG00000106546 D 0.000
XP_002161735.1 Hydra magnipapillata XP_002161735.1 I 0.000
ENSSTOG00000003086 Ictidomys tridecemlineatus ENSSTOG00000003086 I 0.000
ENSLACG00000002803 Latimeria chalumnae ENSLACG00000002803 I 0.000
LotgiG117861 Lottia gigantea LotgiG117861 I 0.000
ENSLAFG00000015328 Loxodonta africana ENSLAFG00000015328 I 0.000
ENSP00000385642 Macaca fascicularis ENSP00000385642 I 0.000
ENSMMUG00000012203 Macaca mulatta ENSMMUG00000012203 I 0.000
ENSMGAG00000010174 Meleagris gallopavo ENSMGAG00000010174 I 0.000
ENSMODG00000001528 Monodelphis domestica ENSMODG00000001528 I 0.000
ENSMPUG00000013964 Mustela putorius furo ENSMPUG00000013964 I 0.000
Ahr Mus musculus ENSMUSG00000019256 D 0.000
Myotis_brandtii_AHR_10031750 Myotis brandtii Myotis_brandtii_AHR_10031750 I 0.000
ENSMLUG00000000097 Myotis lucifugus ENSMLUG00000000097 I 0.000
ENSOPRG00000010358 Ochotona princeps ENSOPRG00000010358 I 0.000
AHR Oryctolagus cuniculus ENSOCUG00000003877 I 0.000
ENSOGAG00000012656 Otolemur garnettii ENSOGAG00000012656 I 0.000
ENSOARG00000009234 Ovis aries ENSOARG00000009234 I 0.000
AHR Pan troglodytes ENSPTRG00000018955 I 0.000
ENSPANG00000002444 Papio anubis ENSPANG00000002444 I 0.000
ENSPSIG00000010051 Pelodiscus sinensis ENSPSIG00000010051 I 0.000
ENSPPYG00000017758 Pongo abelii ENSPPYG00000017758 I 0.000
ENSPCAG00000006894 Procavia capensis ENSPCAG00000006894 I 0.000
PXEA_0000742401 Protopolystoma xenopodis PXEA_0000742401 I 0.000
ENSPVAG00000002167 Pteropus vampyrus ENSPVAG00000002167 I 0.000
Ahr Rattus norvegicus ENSRNOG00000004342 I 0.000
ENSSHAG00000001563 Sarcophilus harrisii ENSSHAG00000001563 I 0.000
SMU15013078 Schmidtea mediterranea SMU15013078 I 0.000
SMU15033026 Schmidtea mediterranea SMU15033026 I 0.000
ENSSARG00000001961 Sorex araneus ENSSARG00000001961 I 0.000
SPU_005022 Strongylocentrotus purpuratus SPU_005022 I 0.000
AHR Sus scrofa ENSSSCG00000030484 I 0.000
ENSSSCG00000015364 Sus scrofa ENSSSCG00000015364 I 0.000
ENSTGUG00000002585 Taeniopygia guttata ENSTGUG00000002585 I 0.000
ENSTSYG00000010830 Tarsius syrichta ENSTSYG00000010830 I 0.000
ENSTTRG00000006913 Tursiops truncatus ENSTTRG00000006913 I 0.000
Tal_R011867 Tyto alba Tal_R011867 I 0.000
ENSVPAG00000008443 Vicugna pacos ENSVPAG00000008443 I 0.000