IRF5 (Cavia porcellus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSCPOG00000000246 T243985_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF5
M02256_2.00 		Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272 		0.981 0.981
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.962 0.962
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.962 0.962
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.962 0.962
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.962 0.962
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.962 0.962
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.962 0.962
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.962 0.962
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.952 0.952
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.733 0.733
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.724 0.724
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.724 0.724
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000000217 IRF 16 121

Links

Other IRF family TFs
Other Cavia porcellus TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_02206 Ancylostoma ceylanicum ANCCEY_02206 N
ANCDUO_19443 Ancylostoma duodenale ANCDUO_19443 N
BTMF_0000954001 Brugia timori BTMF_0000954001 N
BXY_0332200 Bursaphelenchus xylophilus BXY_0332200 N
CBN30611 Caenorhabditis brenneri CBN30611 N
CBG05270 Caenorhabditis briggsae CBG05270 N
nhr-32 Caenorhabditis elegans WBGene00003626 N
CJA10118 Caenorhabditis japonica CJA10118 N
CRE22320 Caenorhabditis remanei CRE22320 N
CRE19235 Caenorhabditis remanei CRE19235 N
nDi.2.2.2.g04775 Dirofilaria immitis nDi.2.2.2.g04775 N
GPLIN_000663400 Globodera pallida GPLIN_000663400 N
GPLIN_000607300 Globodera pallida GPLIN_000607300 N
GPUH_0002529501 Gongylonema pulchrum GPUH_0002529501 N
LOAG_12834 Loa loa LOAG_12834 N
augustus_masked-nMf.1.1.scaf06448-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06448-processed-gene-0.0 N
MhA1_Contig194.frz3.gene8 Meloidogyne hapla MhA1_Contig194.frz3.gene8 N
Minc11538 Meloidogyne incognita Minc11538 N
NECAME_02646 Necator americanus NECAME_02646 N
nOo.2.0.1.g08044 Onchocerca ochengi nOo.2.0.1.g08044 N
WBGene00239074 Onchocerca volvulus WBGene00239074 N
PTRK_0000018500 Parastrongyloides trichosuri PTRK_0000018500 N
scaffold50-EXSNAP2012.1 Pristionchus exspectatus scaffold50-EXSNAP2012.1 N
scaffold429-EXSNAP2012.6 Pristionchus exspectatus scaffold429-EXSNAP2012.6 N
RSKR_0000406200 Rhabditophanes kr3021 RSKR_0000406200 N
RSKR_0000313900 Rhabditophanes kr3021 RSKR_0000313900 N
L596_g18692 Steinernema carpocapsae L596_g18692 N
L596_g18686 Steinernema carpocapsae L596_g18686 N
L893_g20500 Steinernema glaseri L893_g20500 N
L892_g23809 Steinernema scapterisci L892_g23809 N
L892_g2121 Steinernema scapterisci L892_g2121 N
SPAL_0000159200 Strongyloides papillosus SPAL_0000159200 N
SSTP_0000308900 Strongyloides stercoralis SSTP_0000308900 N
SVE_1011400 Strongyloides venezuelensis SVE_1011400 N
SMUV_0001020501 Syphacia muris SMUV_0001020501 N
TCLT_0000508901 Thelazia callipaeda TCLT_0000508901 N
TCNE_0000967201 Toxocara canis TCNE_0000967201 N
WUBG_12380 Wuchereria bancrofti WUBG_12380 N