CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LFY *(Arabidopsis lyrata)* Leafy
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF01698 (FLO_LFY)	IPR002910	Al_scaffold_0008_2690	T244677_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
LFY M02692_2.00	Arabidopsis thaliana	YWTKRACCRSYGGTYMAWR	YWTKRACCRSYGGTYMAWR	SELEX Mathelier et al.(2014) MA0590.1	0.988	0.988
LFY M10895_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$LFY_Q2	0.988	0.988
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Al_scaffold_0008_2690	Leafy	1	396	MDPEGFTSGLFRWNPTRAMVAAPPPVPPPPQQQPATPQMAAFGMRLGGLEGLFGAYGIRFYTAAKIAELGFTASTLVGMKDEELEEMMNSLSHIFRWELLVGERYGIKAAVRAERRRLQEEEEEESSRRRHLLLSAAGDSGTHHALDALSQEDDWTGLSEEPVQQQNQTDAAGNNGGGGSGYWEAGQAKMKKQQQQRRRKKPMVTSVETDDDVNEGDDDDGMDNGNGGGGGGLGTERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLLQVQTIAKDRGEKCPTKVTNQVFRYAKKSGASYINKPKMRHYVHCYALHCLDEDASNALRRAFKERGENVGSWRQACYKPLVNIACRHGWDIDAVFNAHPRLSIWYVPTKLRQLCHLERNNAV

Links
Other Leafy family TFs
Other *Arabidopsis lyrata* TFs