Bra021737 (Brassica rapa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Bra021737 T245064_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra021737.1-P LOB 7 106

Links

Other LOB family TFs
Other Brassica rapa TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_22967 Aegilops tauschii F775_22967 I 0.000
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.000
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.000
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I 0.000
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.000
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.000
LBD16 Arabidopsis thaliana AT2G42430 D 0.000
LBD19 Arabidopsis thaliana AT2G45410 D 0.000
LBD31 Arabidopsis thaliana AT4G00210 I 0.000
LBD30 Arabidopsis thaliana AT4G00220 D 0.000
Bostr.14547s0031 Boechera stricta Bostr.14547s0031 I 0.000
Bostr.25993s0234 Boechera stricta Bostr.25993s0234 I 0.000
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.000
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.000
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.000
Bo4g024610 Brassica oleracea Bo4g024610 I 0.000
Bo4g024620 Brassica oleracea Bo4g024620 I 0.000
Bo4g195510 Brassica oleracea Bo4g195510 I 0.000
Bo9g002150 Brassica oleracea Bo9g002150 I 0.000
Bra004910 Brassica rapa Bra004910 I 0.000
Bra016877 Brassica rapa Bra016877 I 0.000
Bra037322 Brassica rapa Bra037322 I 0.000
Bra040312 Brassica rapa Bra040312 I 0.000
PK25573.1 Cannabis sativa PK25573.1 I 0.000
Cagra.0698s0022 Capsella grandiflora Cagra.0698s0022 I 0.000
Cagra.1261s0013 Capsella grandiflora Cagra.1261s0013 I 0.000
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.000
Carubv10002489m.g Capsella rubella Carubv10002489m.g I 0.000
Carubv10025477m.g Capsella rubella Carubv10025477m.g I 0.000
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.000
evm.TU.supercontig_18.117 Carica papaya evm.TU.supercontig_18.117 I 0.000
evm.TU.supercontig_18.118 Carica papaya evm.TU.supercontig_18.118 I 0.000
Ca_19598 Cicer arietinum Ca_19598 I 0.000
Cla007068 Citrullus lanatus Cla007068 I 0.000
Cla007069 Citrullus lanatus Cla007069 I 0.000
Cla021625 Citrullus lanatus Cla021625 I 0.000
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.000
Ciclev10022291m.g Citrus clementina Ciclev10022291m.g I 0.000
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.000
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.000
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.000
orange1.1g041368m.g Citrus sinensis orange1.1g041368m.g I 0.000
Cucsa.362830 Cucumis sativus Cucsa.362830 I 0.000
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.000
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.000
Thhalv10001778m.g Eutrema salsugineum Thhalv10001778m.g I 0.000
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I 0.000
Thhalv10028937m.g Eutrema salsugineum Thhalv10028937m.g I 0.000
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I 0.000
gene19356-v1.0-hybrid Fragaria vesca gene19356-v1.0-hybrid I 0.000
GLYMA01G34523 Glycine max GLYMA01G34523 I 0.000
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.000
GLYMA03G02631 Glycine max GLYMA03G02631 I 0.000
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.000
GLYMA18G45320 Glycine max GLYMA18G45320 I 0.000
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I 0.000
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.000
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I 0.000
Gorai.007G091600 Gossypium raimondii Gorai.007G091600 I 0.000
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.000
Gorai.008G114300 Gossypium raimondii Gorai.008G114300 I 0.000
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.000
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.717
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.000
Lus10009298.g Linum usitatissimum Lus10009298.g I 0.000
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I 0.000
chr1.CM1255.90.nc Lotus japonicus chr1.CM1255.90.nc N 0.000
chr3.LjT44N20.90.nd Lotus japonicus chr3.LjT44N20.90.nd I 0.000
chr5.CM0494.160.nd Lotus japonicus chr5.CM0494.160.nd I 0.000
LjT35F15.70.nd Lotus japonicus LjT35F15.70.nd I 0.000
MDP0000145761 Malus domestica MDP0000145761 I 0.000
MDP0000254224 Malus domestica MDP0000254224 I 0.000
MDP0000429067 Malus domestica MDP0000429067 I 0.000
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.000
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.000
cassava28672.m1 Manihot esculenta cassava28672.m1 I 0.000
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.000
cassava40137.m1 Manihot esculenta cassava40137.m1 I 0.000
MTR_7g075230 Medicago truncatula MTR_7g075230 I 0.000
MTR_7g096530 Medicago truncatula MTR_7g096530 I 0.000
MTR_8g036105 Medicago truncatula MTR_8g036105 I 0.000
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.000
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.717
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.000
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.000
OBART03G10450 Oryza barthii OBART03G10450 I 0.000
OB03G20590 Oryza brachyantha OB03G20590 I 0.000
OB08G30680 Oryza brachyantha OB08G30680 I 0.758
OB10G12360 Oryza brachyantha OB10G12360 I 0.000
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.707
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.000
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.707
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.000
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.707
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.000
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.000
OLONG_028429 Oryza longistaminata OLONG_028429 I 0.000
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.707
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.000
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.707
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.000
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.707
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.000
OS02G0820500 Oryza sativa OS02G0820500 I 0.707
OS03G0246900 Oryza sativa OS03G0246900 I 0.000
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I 0.000
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.000
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.000
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.000
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.000
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.000
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.701
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.000
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.000
POPTR_0002s14980 Populus trichocarpa POPTR_0002s14980 I 0.000
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.000
POPTR_0014s06580 Populus trichocarpa POPTR_0014s06580 I 0.000
POPTR_0014s06590 Populus trichocarpa POPTR_0014s06590 I 0.000
Pm017935 Prunus mume Pm017935 I 0.000
Pm017936 Prunus mume Pm017936 I 0.000
Pm020627 Prunus mume Pm020627 I 0.727
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.000
PRUPE_ppa017589mg Prunus persica PRUPE_ppa017589mg I 0.000
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.727
30174.m008897 Ricinus communis 30174.m008897 I 0.000
30174.m008898 Ricinus communis 30174.m008898 I 0.000
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.000
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.000
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.000
SapurV1A.0532s0200 Salix purpurea SapurV1A.0532s0200 I 0.000
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I 0.000
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I 0.000
Si015156m.g Setaria italica Si015156m.g I 0.727
Si019578m.g Setaria italica Si019578m.g I 0.000
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I 0.000
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I 0.000
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.000
Sb01g024400 Sorghum bicolor Sb01g024400 I 0.000
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.000
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.000
TCM_005496 Theobroma cacao TCM_005496 I 0.000
TCM_005497 Theobroma cacao TCM_005497 I 0.000
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.000
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I 0.000
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.000
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.000
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.000
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.000
VIT_15s0048g00840 Vitis vinifera VIT_15s0048g00840 I 0.000
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.000
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.000
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.000