CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc03g113360.2
(
Solanum lycopersicum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Solyc03g113360.2
T246084_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc03g113360.2.1
LOB
10
107
ACAACKYQRRRCHDCPLAPYFPADQPKMFQNAHRLFGVSNILKILRQLDPSQKKVAMRSIIYQANARDKYPVYGCVAEIQNLLYNIQFYEEELQAVNA
Links
Other
LOB
family TFs
Other
Solanum lycopersicum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_17.185
Carica papaya
evm.TU.supercontig_17.185
N
0.724
MDP0000153290
Malus domestica
MDP0000153290
N
0.727
MDP0000216231
Malus domestica
MDP0000216231
N
0.745
Pm024623
Prunus mume
Pm024623
N
0.724
PRUPE_ppa025223mg
Prunus persica
PRUPE_ppa025223mg
N
0.724
PGSC0003DMG400013182
Solanum tuberosum
PGSC0003DMG400013182
N
0.949