CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_17.185
(
Carica papaya
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
evm.TU.supercontig_17.185
T246877_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_17.185
LOB
10
108
ACAACKYQRRRCSSECPLAPYFPPDQPKMFQNAHKLFGVSNILKILKTLDSNQKAEAMRSIIYQSDIRDKSPVHGCLGVTQQLQYHIWLAEEELRAVHA
Links
Other
LOB
family TFs
Other
Carica papaya
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_05400
Arthroderma benhamiae
ARB_05400
N
MCYG_00682
Arthroderma otae
MCYG_00682
N
MGYG_01290
Microsporum gypseum
MGYG_01290
N
TEQG_08427
Trichophyton equinum
TEQG_08427
N
H101_07867
Trichophyton interdigitale
H101_07867
N
H102_07612
Trichophyton rubrum
H102_07612
N
H105_07638
Trichophyton soudanense
H105_07638
N
TRV_04815
Trichophyton verrucosum
TRV_04815
N