CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OLONG_007248
(
Oryza longistaminata
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
OLONG_007248
T249552_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK26075.1
M01265_2.00
Cannabis sativa
NNRGTDANWN
NWNTHACYNN
PBM
Lambert et al.(2019)
pTH11260
0.886
0.768
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_007248-R1
MADF
37
108
SEMDAAFRNATLKAPVWEELSRRLAELGYQRSGKKCKEKFENVDKYYKRTKEGRTGRQDGKSYRFFSQLEAL
Links
Other
MADF
family TFs
Other
Oryza longistaminata
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MGG_00587
Magnaporthe oryzae
MGG_00587
N
S40285_06361
Stachybotrys chlorohalonata
S40285_06361
N
UCRPA7_5196
Togninia minima
UCRPA7_5196
N