Bostr.14419s0059 (Boechera stricta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Bostr.14419s0059 T250584_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G47660
M02266_2.00 		Arabidopsis thaliana
RCGGTAAW
WTTACCGY		 PBM
Weirauch et al.(2014)
pTH7911 		0.963 0.914
AT5G47660
M06980_2.00 		Arabidopsis thaliana
RCRGTWAAAAHDDHW
WDHHDTTTTWACYGY		 Dap-seq
OMalley et al.(2016)
AT5G47660_col_a 		0.963 0.914
AT5G47660
M06981_2.00 		Arabidopsis thaliana
WHHHHRCRGTWAAWW
WWTTWACYGYDDDDW		 Dap-seq
OMalley et al.(2016)
AT5G47660_colamp_a 		0.963 0.914
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.14419s0059.1.p MADF 314 386

Links

Other MADF family TFs
Other Boechera stricta TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_079210 Acremonium chrysogenum ACRE_079210 N
CTHT_0061100 Chaetomium thermophilum CTHT_0061100 N
FFUJ_01368 Fusarium fujikuroi FFUJ_01368 N
FGRRES_01176 Fusarium graminearum FGRRES_01176 N
FOXG_00215 Fusarium oxysporum FOXG_00215 N
FPSE_02607 Fusarium pseudograminearum FPSE_02607 N
NechaG103092 Fusarium solani NechaG103092 N
FVEG_01303 Fusarium verticillioides FVEG_01303 N
GGTG_12840 Gaeumannomyces graminis GGTG_12840 N
CMQ_7830 Grosmannia clavigera CMQ_7830 N
MGG_14728 Magnaporthe oryzae MGG_14728 N
MAPG_00613 Magnaporthe poae MAPG_00613 N
X797_003693 Metarhizium robertsii X797_003693 N
estExt_fgenesh1_pm.C_sca_1_chr1_3_00106 Nectria haematococca estExt_fgenesh1_pm.C_sca_1_chr1_3_00106 N
NCU08594 Neurospora crassa NCU08594 N
estExt_Genewise1Plus.C_40043 Neurospora discreta estExt_Genewise1Plus.C_40043 N
NEUTE1DRAFT_151002 Neurospora tetrasperma NEUTE1DRAFT_151002 N
F503_04484 Ophiostoma piceae uamh F503_04484 N
PFICI_01190 Pestalotiopsis fici PFICI_01190 N
SMAC_04892 Sordaria macrospora SMAC_04892 N
SPBR_06896 Sporothrix brasiliensis SPBR_06896 N
HMPREF1624_07538 Sporothrix schenckii HMPREF1624_07538 N
S40288_08143 Stachybotrys chartarum S40288_08143 N
S40285_00890 Stachybotrys chlorohalonata S40285_00890 N
THITE_2113700 Thielavia terrestris THITE_2113700 N
VHEMI06414 Torrubiella hemipterigena VHEMI06414 N
TRIATDRAFT_128029 Trichoderma atroviride TRIATDRAFT_128029 N
TRIVIDRAFT_55751 Trichoderma virens TRIVIDRAFT_55751 N
UV8b_4997 Ustilaginoidea virens UV8b_4997 N
VDAG_03306 Verticillium dahliae VDAG_03306 N