SapurV1A.0047s0660 (Salix purpurea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 SapurV1A.0047s0660 T250838_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.898 0.794
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.898 0.794
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0047s0660.1.p MADF 117 188
SapurV1A.0047s0660.1.p MADF 537 606
SapurV1A.0047s0660.2.p MADF 117 188
SapurV1A.0047s0660.2.p MADF 537 606
SapurV1A.0047s0660.3.p MADF 1 46
SapurV1A.0047s0660.3.p Myb 378 435
SapurV1A.0047s0660.4.p MADF 1 46
SapurV1A.0047s0660.4.p Myb 378 435

Links

Other MADF family TFs
Other Salix purpurea TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G25830 Brachypodium distachyon BRADI2G25830 N
MLOC_21457 Hordeum vulgare MLOC_21457 N
OBART05G15900 Oryza barthii OBART05G15900 N
OB05G23840 Oryza brachyantha OB05G23840 N
ORGLA05G0138100 Oryza glaberrima ORGLA05G0138100 N
OGLUM05G16820 Oryza glumaepatula OGLUM05G16820 N
BGIOSGA019849 Oryza indica BGIOSGA019849 N
OLONG_006623 Oryza longistaminata OLONG_006623 N
ONIVA05G16510 Oryza nivara ONIVA05G16510 N
OPUNC05G14080 Oryza punctata OPUNC05G14080 N
ORUFI05G17050 Oryza rufipogon ORUFI05G17050 N
OS05G0404000 Oryza sativa OS05G0404000 N
Pavir.J03675 Panicum virgatum Pavir.J03675 N
Pavir.J39419 Panicum virgatum Pavir.J39419 N
Si021844m.g Setaria italica Si021844m.g N
Sb09g019800 Sorghum bicolor Sb09g019800 N
TRIUR3_11739 Triticum urartu TRIUR3_11739 N
GRMZM2G029933 Zea mays GRMZM2G029933 N