Bo03856s010 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo03856s010 T253045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL27
M08145_2.00 		Arabidopsis thaliana
MCMAAAATRGAAAB
VTTTCYATTTTKGK		 ChIP-seq
Mathelier et al.(2014)
MA1012.1 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo03856s010.1 MADS box 10 54

Links

Other MADS box family TFs
Other Brassica oleracea TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000011610 Ailuropoda melanoleuca ENSAMEG00000011610 N 0.000
ENSAPLG00000008758 Anas platyrhynchos ENSAPLG00000008758 N 0.000
Afo_R006305 Aptenodytes forsteri Afo_R006305 N 0.000
Brh_R011091 Buceros rhinoceros Brh_R011091 N 0.000
Aan_R007949 Calypte anna Aan_R007949 N 0.000
Cmyd_10013756 Chelonia mydas Cmyd_10013756 N 0.000
ENSCSAG00000007636 Chlorocebus sabaeus ENSCSAG00000007636 N 0.000
ENSFALG00000003942 Ficedula albicollis ENSFALG00000003942 N 0.000
ARNTL2 Gallus gallus ENSGALG00000014096 N 0.000
Gfo_R015185 Geospiza fortis Gfo_R015185 N 0.000
ARNTL2 Homo sapiens ENSG00000029153 N 0.000
ENSP00000266503 Macaca fascicularis ENSP00000266503 N 0.000
ARNTL2 Macaca mulatta ENSMMUG00000023249 N 0.000
ARNTL2 Meleagris gallopavo ENSMGAG00000013735 N 0.000
ENSMPUG00000010512 Mustela putorius furo ENSMPUG00000010512 N 0.000
Myotis_brandtii_ARNTL2_10027352 Myotis brandtii Myotis_brandtii_ARNTL2_10027352 N 0.000
ENSNLEG00000005463 Nomascus leucogenys ENSNLEG00000005463 N 0.000
ENSOARG00000019779 Ovis aries ENSOARG00000019779 N 0.000
ARNTL2 Pan troglodytes ENSPTRG00000004788 N 0.000
ENSPANG00000004474 Papio anubis ENSPANG00000004474 N 0.000
ENSPSIG00000009416 Pelodiscus sinensis ENSPSIG00000009416 N 0.000
ENSPPYG00000004380 Pongo abelii ENSPPYG00000004380 N 0.000
ARNTL2 Procavia capensis ENSPCAG00000008486 N 0.000
ARNTL2 Pteropus vampyrus ENSPVAG00000013771 N 0.000
ENSTGUG00000012163 Taeniopygia guttata ENSTGUG00000012163 N 0.000
ENSTSYG00000005541 Tarsius syrichta ENSTSYG00000005541 N 0.000
ARNTL2 Tursiops truncatus ENSTTRG00000012339 N 0.000
Tal_R011603 Tyto alba Tal_R011603 N 0.000