Bra029469 (Brassica rapa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bra029469 T253344_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.896 0.896
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra029469.1-P MADS box 10 58

Links

Other MADS box family TFs
Other Brassica rapa TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA11G36010 Glycine max GLYMA11G36010 N
GLYMA18G02430 Glycine max GLYMA18G02430 N
Gorai.007G243200 Gossypium raimondii Gorai.007G243200 I
LjT15A14.110.nd Lotus japonicus LjT15A14.110.nd N
Solyc04g054320.2 Solanum lycopersicum Solyc04g054320.2 I
PGSC0003DMG400012792 Solanum tuberosum PGSC0003DMG400012792 I
VIT_07s0031g01320 Vitis vinifera VIT_07s0031g01320 I