CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM04G10110
(
Oryza glumaepatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OGLUM04G10110
T255046_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM04G10110.1
MADS box
11
61
RIEDRVRRGICFRKRLAGLEKKAEKLAVLCDAHVGFVVLSCSGDDANPHHF
Links
Other
MADS box
family TFs
Other
Oryza glumaepatula
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HpaG811344
Hyaloperonospora arabidopsidis
HpaG811344
N
estExt_fgenesh1_kg.C_330028
Phytophthora capsici
estExt_fgenesh1_kg.C_330028
N
PITG_16850
Phytophthora infestans
PITG_16850
N
PITG_16853
Phytophthora infestans
PITG_16853
N
fgenesh_scip_prom.46568.532
Phytophthora kernoviae
fgenesh_scip_prom.46568.532
N
fgenesh_scip_prom.28083.3324
Phytophthora lateralis
fgenesh_scip_prom.28083.3324
N
F443_15102
Phytophthora parasitica
F443_15102
N
Phyra75434
Phytophthora ramorum
Phyra75434
N
Phyra85992
Phytophthora ramorum
Phyra85992
N
Physo135095
Phytophthora sojae
Physo135095
N
Physo135096
Phytophthora sojae
Physo135096
N
Physo145373
Phytophthora sojae
Physo145373
N
PYU1_G009717
Pythium ultimum
PYU1_G009717
N
maker-pve_contig_551-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_551-fgenesh-gene-0.0
N