ORUFI04G11600 (Oryza rufipogon)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ORUFI04G11600 T255451_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI04G11600.1 MADS box 38 88

Links

Other MADS box family TFs
Other Oryza rufipogon TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK06453.1 Cannabis sativa PK06453.1 I
HpaG811475 Hyaloperonospora arabidopsidis HpaG811475 N
fgenesh1_pg.C_scaffold_26000008 Phytophthora capsici fgenesh1_pg.C_scaffold_26000008 N
estExt_fgenesh1_kg.C_260006 Phytophthora capsici estExt_fgenesh1_kg.C_260006 N
PITG_19362 Phytophthora infestans PITG_19362 N
PITG_19361 Phytophthora infestans PITG_19361 N
PITG_11731 Phytophthora infestans PITG_11731 N
fgenesh_scip_prom.46568.8839 Phytophthora kernoviae fgenesh_scip_prom.46568.8839 N
fgenesh_scip_prom.46568.8840 Phytophthora kernoviae fgenesh_scip_prom.46568.8840 I
fgenesh_scip_prom.28083.12017 Phytophthora lateralis fgenesh_scip_prom.28083.12017 N
fgenesh_scip_prom.28083.12018 Phytophthora lateralis fgenesh_scip_prom.28083.12018 N
F443_03223 Phytophthora parasitica F443_03223 N
F443_20701 Phytophthora parasitica F443_20701 N
F443_03220 Phytophthora parasitica F443_03220 N
Phyra73305 Phytophthora ramorum Phyra73305 N
Phyra73306 Phytophthora ramorum Phyra73306 N
Physo131312 Phytophthora sojae Physo131312 N
Physo131313 Phytophthora sojae Physo131313 N
maker-pag1_scaffold_151-fgenesh-gene-0.9 Pythium aphanidermatum maker-pag1_scaffold_151-fgenesh-gene-0.9 N
maker-pag1_scaffold_151-fgenesh-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_151-fgenesh-gene-0.1 I
maker-par_contig_8833-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_8833-fgenesh-gene-0.0 N
maker-par_contig_173-fgenesh-gene-0.4 Pythium arrhenomanes maker-par_contig_173-fgenesh-gene-0.4 N
maker-pir_contig_142-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_142-fgenesh-gene-0.5 N
PYU1_G003097 Pythium ultimum PYU1_G003097 N
PYU1_G003104 Pythium ultimum PYU1_G003104 N
maker-pve_contig_603-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_603-fgenesh-gene-0.5 N
maker-pve_contig_603-snap-gene-0.9 Pythium vexans maker-pve_contig_603-snap-gene-0.9 N