CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g018110.1
(
Solanum lycopersicum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Solyc10g018110.1
T256370_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g018110.1.1
MADS box
16
63
KIENESARLTTFSKRRSGLYKKACELVRECDVALGIVMSSPKGIPYSF
Links
Other
MADS box
family TFs
Other
Solanum lycopersicum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI009244
Acyrthosiphon pisum
ACYPI009244
I
GB46056
Apis mellifera
GB46056
I
ACEP24088
Atta cephalotes
ACEP24088
I
Cflo_05798--XP_001122645.1_APIME
Camponotus floridanus
Cflo_05798--XP_001122645.1_APIME
I
CGI_10023955
Crassostrea gigas
CGI_10023955
I
YQE_02517
Dendroctonus ponderosae
YQE_02517
I
GG23955
Drosophila erecta
FBgn0116094
I
GH13020
Drosophila grimshawi
FBgn0120498
I
Hand
Drosophila melanogaster
FBgn0032209
D
GI18263
Drosophila mojavensis
FBgn0141002
I
GL18976
Drosophila persimilis
FBgn0156577
I
GA14815
Drosophila pseudoobscura
FBgn0074842
I
GM11834
Drosophila sechellia
FBgn0166775
I
GD22284
Drosophila simulans
FBgn0193692
I
GE26185
Drosophila yakuba
FBgn0243221
I
HHAL010291-PA
Halyomorpha halys
HHAL010291-PA
I
Hsal_12649--XP_001122645.1_APIME
Harpegnathos saltator
Hsal_12649--XP_001122645.1_APIME
I
ISCW009436
Ixodes scapularis
ISCW009436
I
LCUP017809
Lucilia cuprina
LCUP017809
I
LLOJ007342
Lutzomyia longipalpis
LLOJ007342
I
MDOA015204
Musca domestica
MDOA015204
I
NV12516
Nasonia vitripennis
NV12516
I
Ocbimv22024043m.g
Octopus bimaculoides
Ocbimv22024043m.g
I
PHUM088400
Pediculus humanus
PHUM088400
I
PPAI010228
Phlebotomus papatasi
PPAI010228
I
RPRC005573
Rhodnius prolixus
RPRC005573
I
SINV12583
Solenopsis invicta
SINV12583
I
TC004726
Tribolium castaneum
TC004726
I
L798_02599
Zootermopsis nevadensis
L798_02599
I