CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ciclev10010485m.g
(
Citrus clementina
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Ciclev10010485m.g
T257881_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10010485m
MADS box
10
52
KIEKQKARMVTFSKRRQAEEYANITGSQITVLVFSSAGNPYVH
Links
Other
MADS box
family TFs
Other
Citrus clementina
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01832
Capronia coronata
A1O1_01832
N
A1O3_00020
Capronia epimyces
A1O3_00020
N
PV04_04618
Capronia semiimmersa
PV04_04618
N
PV04_02869
Capronia semiimmersa
PV04_02869
N
Z519_08371
Cladophialophora bantiana
Z519_08371
N
G647_04039
Cladophialophora carrionii
G647_04039
N
G647_05669
Cladophialophora carrionii
G647_05669
N
PV07_05631
Cladophialophora immunda
PV07_05631
N
A1O5_01092
Cladophialophora psammophila
A1O5_01092
N
A1O7_04642
Cladophialophora yegresii
A1O7_04642
N
HMPREF1541_10181
Cyphellophora europaea
HMPREF1541_10181
N
A1O9_09700
Exophiala aquamarina
A1O9_09700
N
HMPREF1120_03298
Exophiala dermatitidis
HMPREF1120_03298
N
PV10_02880
Exophiala mesophila
PV10_02880
N
PV10_06607
Exophiala mesophila
PV10_06607
N
PV06_05296
Exophiala oligosperma
PV06_05296
N
PV11_01810
Exophiala sideris
PV11_01810
N
PV11_04485
Exophiala sideris
PV11_04485
N
PV08_08727
Exophiala spinifera
PV08_08727
N
PV08_11635
Exophiala spinifera
PV08_11635
N
PV08_03235
Exophiala spinifera
PV08_03235
N
PV05_02243
Exophiala xenobiotica
PV05_02243
N
Z517_06555
Fonsecaea pedrosoi
Z517_06555
N
e_gw1.50.54.1
Mycosphaerella fijiensis
e_gw1.50.54.1
N
Z518_00766
Rhinocladiella mackenziei
Z518_00766
N
Z518_02089
Rhinocladiella mackenziei
Z518_02089
N