CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.K02593
(
Eucalyptus grandis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Eucgr.K02593
T258017_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.K02593.1
MADS box
10
56
LIPNEKAQRITYEKRKKNVMKKAQEFATLCDLDTCMIIYGPTGSATA
Links
Other
MADS box
family TFs
Other
Eucalyptus grandis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYB114
Arabidopsis thaliana
AT1G66380
I
Cagra.0463s0005
Capsella grandiflora
Cagra.0463s0005
N
Eucgr.J01558
Eucalyptus grandis
Eucgr.J01558
N
Eucgr.F02843
Eucalyptus grandis
Eucgr.F02843
N
Eucgr.F02845
Eucalyptus grandis
Eucgr.F02845
N
gene26513-v1.0-hybrid
Fragaria vesca
gene26513-v1.0-hybrid
N
Lus10006541.g
Linum usitatissimum
Lus10006541.g
N
MDP0000317257
Malus domestica
MDP0000317257
N
MDP0000127691
Malus domestica
MDP0000127691
N
MTR_0023s0210
Medicago truncatula
MTR_0023s0210
N
mgf022083m
Mimulus guttatus
mgf022083m
N
BGIOSGA010547
Oryza indica
BGIOSGA010547
N
ORUFI03G21780
Oryza rufipogon
ORUFI03G21780
N
Pm029444
Prunus mume
Pm029444
N
Pm029437
Prunus mume
Pm029437
N
SapurV1A.0230s0230
Salix purpurea
SapurV1A.0230s0230
N
SapurV1A.0553s0120
Salix purpurea
SapurV1A.0553s0120
N
PGSC0003DMG400013966
Solanum tuberosum
PGSC0003DMG400013966
N
VIT_02s0033g00370
Vitis vinifera
VIT_02s0033g00370
N