Contig16171.0.g56 (Oxytricha trifallax)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Contig16171.0.g56 T259213_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Contig16171.0.g56 MADS box 10 58

Links

Other MADS box family TFs
Other Oxytricha trifallax TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_013_00290 Aquilegia coerulea Aquca_013_00290 N
PK09701.1 Cannabis sativa PK09701.1 N
evm.TU.supercontig_107.76 Carica papaya evm.TU.supercontig_107.76 N
gene13234-v1.0-hybrid Fragaria vesca gene13234-v1.0-hybrid N
GLYMA10G37780 Glycine max GLYMA10G37780 N
Gorai.004G117900 Gossypium raimondii Gorai.004G117900 N
Gorai.008G275600 Gossypium raimondii Gorai.008G275600 N
MDP0000157870 Malus domestica MDP0000157870 N
MDP0000291317 Malus domestica MDP0000291317 N
MDP0000905888 Malus domestica MDP0000905888 N
cassava18962.valid.m1 Manihot esculenta cassava18962.valid.m1 N
mgf002951m Mimulus guttatus mgf002951m N
GSMUA_Achr1G03120_001 Musa acuminata GSMUA_Achr1G03120_001 N
OBART09G20240 Oryza barthii OBART09G20240 N
ORGLA09G0165100 Oryza glaberrima ORGLA09G0165100 N
OGLUM09G20980 Oryza glumaepatula OGLUM09G20980 N
BGIOSGA031305 Oryza indica BGIOSGA031305 N
OLONG_005584 Oryza longistaminata OLONG_005584 N
OMERI01G25790 Oryza meridionalis OMERI01G25790 N
OPUNC09G18580 Oryza punctata OPUNC09G18580 N
ORUFI09G21860 Oryza rufipogon ORUFI09G21860 N
OS09G0570200 Oryza sativa OS09G0570200 N
Pm019310 Prunus mume Pm019310 N
PRUPE_ppa002336mg Prunus persica PRUPE_ppa002336mg N
30169.m006244 Ricinus communis 30169.m006244 N
TCM_015200 Theobroma cacao TCM_015200 N
VIT_16s0050g00700 Vitis vinifera VIT_16s0050g00700 N
GRMZM2G142502 Zea mays GRMZM2G142502 N
AC234522.1_FG009 Zea mays AC234522.1_FG009 N