CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM04G03070
(
Oryza glumaepatula
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
OGLUM04G03070
T260751_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM04G03070.1
MBD
33
97
NDVDDRPGWLPDGWIMEVYLGDDGTIYRYYICPVSGRTFTMKLEVLHYLFSEMDQCFTESKNHEL
OGLUM04G03070.1
MBD
99
169
SNLTRTHEWLPKGWLVEIRAGGDNMDKMYKFYVYPPHRVRLFSKDDVLLYIKEMKISGFDTDGQCNTSSQE
OGLUM04G03070.1
MBD
178
271
NPKGLPQGWVKEVVFRKTNTGRIRRDWHYTDPIKNYVFRTKRSAALYVETGKVTIHAFVQKTSVHEVYSFEKFTHLHESLQKRLNLGRTNQLRT
Links
Other
MBD
family TFs
Other
Oryza glumaepatula
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
pde191
Arabidopsis thaliana
AT4G38160
N
Bostr.25542s0005
Boechera stricta
Bostr.25542s0005
N
PK01272.1
Cannabis sativa
PK01272.1
N
Cagra.1383s0005
Capsella grandiflora
Cagra.1383s0005
N
Carubv10007517m.g
Capsella rubella
Carubv10007517m.g
N
Thhalv10004546m.g
Eutrema salsugineum
Thhalv10004546m.g
N
MDP0000296585
Malus domestica
MDP0000296585
N
Pm020708
Prunus mume
Pm020708
N
PRUPE_ppa008508mg
Prunus persica
PRUPE_ppa008508mg
N