gene15686-v1.0-hybrid (Fragaria vesca)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 gene15686-v1.0-hybrid T261502_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna15686.1-v1.0-hybrid MBD 6 78

Links

Other MBD family TFs
Other Fragaria vesca TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I
CBF4 Arabidopsis lyrata scaffold_801637.1 I
DREB1A Arabidopsis thaliana AT4G25480 D
DREB1D Arabidopsis thaliana AT5G51990 D
DREB1C Arabidopsis thaliana AT4G25470 D
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I
Bo9g104770 Brassica oleracea Bo9g104770 I
Bra028290 Brassica rapa Bra028290 I
PK23332.1 Cannabis sativa PK23332.1 I
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I
Cagra.2248s0025 Capsella grandiflora Cagra.2248s0025 I
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I
Carubv10027759m.g Capsella rubella Carubv10027759m.g I
Carubv10006809m.g Capsella rubella Carubv10006809m.g I
Carubv10005709m.g Capsella rubella Carubv10005709m.g I
Cla002362 Citrullus lanatus Cla002362 I
Cucsa.302750 Cucumis sativus Cucsa.302750 I
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I
GLYMA16G32330 Glycine max GLYMA16G32330 I
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I
Gorai.008G280600 Gossypium raimondii Gorai.008G280600 I
cassava35062.m1 Manihot esculenta cassava35062.m1 I
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I
mgf026642m Mimulus guttatus mgf026642m I
GSMUA_Achr6G13340_001 Musa acuminata GSMUA_Achr6G13340_001 I
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I
Pm019386 Prunus mume Pm019386 I
30147.m014313 Ricinus communis 30147.m014313 I
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I
VIT_06s0061g01390 Vitis vinifera VIT_06s0061g01390 I