CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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pde191
(
Populus trichocarpa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
POPTR_0009s17140
T263431_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0009s17140.1
mTERF
15
294
RASGNWAYLKTIGIQERKLPSIISKCPKVLTLGLNEKLIPMVECLATLGSKPREIASAITRFPHILSHSVEEKLCPLLAFFQALGVPEKQLGKILLLNPRLISYSIDSKLTQIVDFLAALGLTKDGMIGKVLVKHPFIMGYSVDKRLRPTSEFLKSVGLTELDLQTVVMNFPEVLCRDVNKILKPNFAYLRRCGFNDRQIAALVTGYPPILIKSIRNSLEPRIKFLVEVMGRQIDEVVDYPNFFQHGLKKTLESRHKLLKQRKLDCSLSEMLGCNQKKFL
Links
Other
mTERF
family TFs
Other
Populus trichocarpa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.25542s0005
Boechera stricta
Bostr.25542s0005
N
0.739
Cagra.1383s0005
Capsella grandiflora
Cagra.1383s0005
N
0.732
Thhalv10004546m.g
Eutrema salsugineum
Thhalv10004546m.g
N
0.764
gene17122-v1.0-hybrid
Fragaria vesca
gene17122-v1.0-hybrid
N
0.808
MDP0000756985
Malus domestica
MDP0000756985
N
0.754
cassava6394.valid.m1
Manihot esculenta
cassava6394.valid.m1
N
0.755
Pm020708
Prunus mume
Pm020708
N
0.772
SapurV1A.0216s0390
Salix purpurea
SapurV1A.0216s0390
N
0.888
PGSC0003DMG400023133
Solanum tuberosum
PGSC0003DMG400023133
N
0.723