Cagra.2552s0028 (Capsella grandiflora)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Cagra.2552s0028 T264629_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2552s0028.1.p mTERF 97 180
Cagra.2552s0028.1.p mTERF 181 489
Cagra.2552s0028.2.p mTERF 97 180
Cagra.2552s0028.2.p mTERF 181 489

Links

Other mTERF family TFs
Other Capsella grandiflora TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00025p00060270 Amborella trichopoda AMTR_s00025p00060270 N 0.719
Aquca_026_00063 Aquilegia coerulea Aquca_026_00063 N 0.760
fgenesh2_kg.6__3397__AT4G02990.1 Arabidopsis lyrata fgenesh2_kg.6__3397__AT4G02990.1 N 0.972
MTERF4 Arabidopsis thaliana AT4G02990 N 0.961
Bostr.2983s0143 Boechera stricta Bostr.2983s0143 N 0.979
Bo9g006180 Brassica oleracea Bo9g006180 N 0.892
Bra036228 Brassica rapa Bra036228 N 0.887
PK15839.1 Cannabis sativa PK15839.1 N 0.771
Carubv10003638m.g Capsella rubella Carubv10003638m.g N 0.995
Ca_25867 Cicer arietinum Ca_25867 N 0.742
Cla005647 Citrullus lanatus Cla005647 N 0.762
Ciclev10019732m.g Citrus clementina Ciclev10019732m.g N 0.755
orange1.1g010066m.g Citrus sinensis orange1.1g010066m.g N 0.755
Cucsa.033690 Cucumis sativus Cucsa.033690 N 0.758
Eucgr.A01358 Eucalyptus grandis Eucgr.A01358 N 0.727
Thhalv10028570m.g Eutrema salsugineum Thhalv10028570m.g N 0.938
GLYMA02G38800 Glycine max GLYMA02G38800 N 0.755
Gorai.004G084100 Gossypium raimondii Gorai.004G084100 N 0.714
Lus10014877.g Linum usitatissimum Lus10014877.g N 0.775
cassava29542.valid.m1 Manihot esculenta cassava29542.valid.m1 N 0.789
MTR_5g068860 Medicago truncatula MTR_5g068860 N 0.745
mgf009605m Mimulus guttatus mgf009605m N 0.768
mgf007983m Mimulus guttatus mgf007983m N 0.768
POPTR_0014s13360 Populus trichocarpa POPTR_0014s13360 N 0.796
Pm019894 Prunus mume Pm019894 N 0.796
PRUPE_ppa004198mg Prunus persica PRUPE_ppa004198mg N 0.796
29703.m001536 Ricinus communis 29703.m001536 N 0.760
SapurV1A.0053s0470 Salix purpurea SapurV1A.0053s0470 N 0.776
Solyc04g005630.2 Solanum lycopersicum Solyc04g005630.2 N 0.722
PGSC0003DMG400002856 Solanum tuberosum PGSC0003DMG400002856 N 0.724
TCM_004475 Theobroma cacao TCM_004475 N 0.786
VIT_07s0104g00720 Vitis vinifera VIT_07s0104g00720 N 0.777