Bo4g025810 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo4g025810 T267304_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.744 0.785
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.697 0.699
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.697 0.699
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.697 0.699
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.685 0.699
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.685 0.699
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.685 0.699
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.680 0.688
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.672 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g025810.1 Myb 50 96
Bo4g025810.1 Myb 102 147

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI008922 Acyrthosiphon pisum ACYPI008922 N
AAEL009171 Aedes aegypti AAEL009171 N
AALB007121 Anopheles albimanus AALB007121 N
AARA010071 Anopheles arabiensis AARA010071 N
AATE016879 Anopheles atroparvus AATE016879 N
ACHR006959 Anopheles christyi ACHR006959 N
ACOM034973 Anopheles coluzzii ACOM034973 N
ADAC008608 Anopheles darlingi ADAC008608 N
ADIR002890 Anopheles dirus ADIR002890 N
AEPI007432 Anopheles epiroticus AEPI007432 N
AFAF018426 Anopheles farauti AFAF018426 N
AFUN001494 Anopheles funestus AFUN001494 N
AGAP003726 Anopheles gambiae AGAP003726 N
AMEC020789 Anopheles melas AMEC020789 N
AMEM010172 Anopheles merus AMEM010172 N
AMIN002970 Anopheles minimus AMIN002970 N
AQUA001486 Anopheles quadriannulatus AQUA001486 N
ASTEI00671 Anopheles stephensi ASTEI00671 N
GB44555 Apis mellifera GB44555 N
ACEP24968 Atta cephalotes ACEP24968 N
BGIBMGA011510 Bombyx mori BGIBMGA011510 N
fgenesh2_pg.scaffold_447000002 Branchiostoma floridae fgenesh2_pg.scaffold_447000002 N
estExt_fgenesh2_pg.C_4800031 Branchiostoma floridae estExt_fgenesh2_pg.C_4800031 N
CapteG195496 Capitella teleta CapteG195496 N
CGI_10009013 Crassostrea gigas CGI_10009013 N
CpipJ_CPIJ001396 Culex pipiens CpipJ_CPIJ001396 N
CPIJ001396 Culex quinquefasciatus CPIJ001396 N
DAPPUDRAFT_191081 Daphnia pulex DAPPUDRAFT_191081 N
YQE_10681 Dendroctonus ponderosae YQE_10681 N
GG12336 Drosophila erecta FBgn0104626 N
CG13624 Drosophila melanogaster FBgn0039209 N
GM23477 Drosophila sechellia FBgn0178344 N
GD18285 Drosophila simulans FBgn0189818 N
GJ23851 Drosophila virilis FBgn0210946 N
GK14305 Drosophila willistoni FBgn0216311 N
HHAL003878-PA Halyomorpha halys HHAL003878-PA N
Hsal_14938--XP_397095.2_APIME Harpegnathos saltator Hsal_14938--XP_397095.2_APIME N
HMEL006500 Heliconius melpomene HMEL006500 N
ISCW005126 Ixodes scapularis ISCW005126 N
LDEC013255 Leptinotarsa decemlineata LDEC013255 N
LotgiG231402 Lottia gigantea LotgiG231402 N
LLOJ008588 Lutzomyia longipalpis LLOJ008588 N
MCINX002154 Melitaea cinxia MCINX002154 N
NV18305 Nasonia vitripennis NV18305 N
NEMVEDRAFT_v1g238168 Nematostella vectensis NEMVEDRAFT_v1g238168 N
Ocbimv22031434m.g Octopus bimaculoides Ocbimv22031434m.g N
PHUM239100 Pediculus humanus PHUM239100 N
PPAI007084 Phlebotomus papatasi PPAI007084 N
RPRC005655 Rhodnius prolixus RPRC005655 N
Sakowv30041832m.g Saccoglossus kowalevskii Sakowv30041832m.g N
SMAR013202 Strigamia maritima SMAR013202 N
tetur43g00160 Tetranychus urticae tetur43g00160 N
TC000275 Tribolium castaneum TC000275 N