Bo7g063830 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g063830 T267476_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.909 0.989
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.909 0.989
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.909 0.989
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.833 0.892
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.833 0.892
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.833 0.892
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.833 0.892
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.833 0.892
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.798 0.860
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.798 0.839
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.798 0.839
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.785 0.849
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.684 0.774
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.679 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g063830.1 Myb 6 52
Bo7g063830.1 Myb 58 103

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

324 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_036480 Albugo laibachii ALNC14_036480 N 0.000
ALNC14_061910 Albugo laibachii ALNC14_061910 N 0.000
ALNC14_092860 Albugo laibachii ALNC14_092860 N 0.000
ALNC14_110220 Albugo laibachii ALNC14_110220 N 0.000
HpaG810452 Hyaloperonospora arabidopsidis HpaG810452 N 0.000
HpaG808860 Hyaloperonospora arabidopsidis HpaG808860 N 0.000
fgenesh1_pm.C_scaffold_10000249 Phytophthora capsici fgenesh1_pm.C_scaffold_10000249 N 0.000
e_gw1.457.7.1 Phytophthora capsici e_gw1.457.7.1 N 0.000
fgenesh1_pg.C_scaffold_17000111 Phytophthora capsici fgenesh1_pg.C_scaffold_17000111 N 0.000
estExt_fgenesh1_kg.C_21048 Phytophthora capsici estExt_fgenesh1_kg.C_21048 N 0.000
PITG_04694 Phytophthora infestans PITG_04694 N 0.000
PITG_04700 Phytophthora infestans PITG_04700 N 0.000
PITG_20387 Phytophthora infestans PITG_20387 N 0.000
fgenesh_scip_prom.46568.6540 Phytophthora kernoviae fgenesh_scip_prom.46568.6540 N 0.000
fgenesh_scip_prom.46568.9529 Phytophthora kernoviae fgenesh_scip_prom.46568.9529 N 0.000
fgenesh_scip_prom.28083.11749 Phytophthora lateralis fgenesh_scip_prom.28083.11749 N 0.000
fgenesh_scip_prom.28083.12007 Phytophthora lateralis fgenesh_scip_prom.28083.12007 N 0.000
fgenesh_scip_prom.28083.5336 Phytophthora lateralis fgenesh_scip_prom.28083.5336 N 0.000
F443_08033 Phytophthora parasitica F443_08033 N 0.000
F443_00152 Phytophthora parasitica F443_00152 N 0.000
F443_22431 Phytophthora parasitica F443_22431 N 0.000
F443_15766 Phytophthora parasitica F443_15766 N 0.000
F443_15765 Phytophthora parasitica F443_15765 N 0.000
F443_15764 Phytophthora parasitica F443_15764 N 0.000
F443_13225 Phytophthora parasitica F443_13225 N 0.000
Phyra85976 Phytophthora ramorum Phyra85976 N 0.000
Phyra85808 Phytophthora ramorum Phyra85808 N 0.000
Phyra80975 Phytophthora ramorum Phyra80975 N 0.000
Phyra75440 Phytophthora ramorum Phyra75440 N 0.000
Physo138014 Phytophthora sojae Physo138014 N 0.000
Physo134017 Phytophthora sojae Physo134017 N 0.000
Physo130849 Phytophthora sojae Physo130849 N 0.000
Physo142188 Phytophthora sojae Physo142188 N 0.000
Physo142190 Phytophthora sojae Physo142190 N 0.000
Physo142191 Phytophthora sojae Physo142191 N 0.000
Physo142192 Phytophthora sojae Physo142192 N 0.000
maker-pag1_scaffold_785-snap-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_785-snap-gene-0.4 N 0.000
maker-pag1_scaffold_539-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_539-snap-gene-0.8 N 0.000
maker-pag1_scaffold_526-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_526-fgenesh-gene-0.3 N 0.000
maker-par_contig_2316-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_2316-fgenesh-gene-0.0 N 0.000
maker-pir_contig_636-snap-gene-0.12 Pythium irregulare maker-pir_contig_636-snap-gene-0.12 N 0.000
maker-pir_contig_698-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_698-fgenesh-gene-0.1 N 0.000
maker-pir_contig_1338-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_1338-fgenesh-gene-0.2 N 0.000
maker-piw_contig_9122-snap-gene-0.1 Pythium iwayamai maker-piw_contig_9122-snap-gene-0.1 N 0.000
maker-piw_contig_10342-snap-gene-0.1 Pythium iwayamai maker-piw_contig_10342-snap-gene-0.1 N 0.000
PYU1_G003405 Pythium ultimum PYU1_G003405 N 0.000
PYU1_G007486 Pythium ultimum PYU1_G007486 N 0.000
PYU1_G007487 Pythium ultimum PYU1_G007487 N 0.000
maker-pve_contig_563-fgenesh-gene-0.8 Pythium vexans maker-pve_contig_563-fgenesh-gene-0.8 N 0.000
maker-pve_contig_1305-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_1305-fgenesh-gene-0.0 N 0.000
SPRG_00136 Saprolegnia parasitica SPRG_00136 N 0.000
SPRG_11849 Saprolegnia parasitica SPRG_11849 N 0.000
SPRG_03693 Saprolegnia parasitica SPRG_03693 N 0.000
SPRG_00586 Saprolegnia parasitica SPRG_00586 N 0.000