CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra009245
(
Brassica rapa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bra009245
T267812_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra009245.1-P
Myb
14
61
KGAWTTEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGKSCRLRWANYL
Bra009245.1-P
Myb
67
88
RGEFSYEEEQIIIMLHASRGNK
Links
Other
Myb/SANT
family TFs
Other
Brassica rapa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo9g175680
Brassica oleracea
Bo9g175680
I
0.677
Cagra.2925s0017
Capsella grandiflora
Cagra.2925s0017
I
0.677
Carubv10001328m.g
Capsella rubella
Carubv10001328m.g
I
0.677
evm.TU.supercontig_111.24
Carica papaya
evm.TU.supercontig_111.24
N
0.790
Lus10015713.g
Linum usitatissimum
Lus10015713.g
N
0.764
BGIOSGA003347
Oryza indica
BGIOSGA003347
I
0.693
SapurV1A.3841s0010
Salix purpurea
SapurV1A.3841s0010
N
0.672
GRMZM2G016020
Zea mays
GRMZM2G016020
I
0.672
GRMZM2G129872
Zea mays
GRMZM2G129872
I
0.672