Bra010593 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra010593 T267828_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.838 0.924
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.838 0.924
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.837 0.946
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.798 0.891
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.763 0.848
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.763 0.848
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.763 0.848
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.738 0.826
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.738 0.826
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.738 0.826
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.738 0.826
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.738 0.826
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.675 0.750
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra010593.1-P Myb 13 59
Bra010593.1-P Myb 66 110

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

294 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.000
ANCDUO_24681 Ancylostoma duodenale ANCDUO_24681 N 0.000
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.000
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.000
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.000
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.000
CBN25890 Caenorhabditis brenneri CBN25890 N 0.000
CBN31048 Caenorhabditis brenneri CBN31048 I 0.000
CBG19594 Caenorhabditis briggsae CBG19594 I 0.000
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.000
CRE06661 Caenorhabditis remanei CRE06661 I 0.000
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.000
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.000
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.000
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.000
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.000
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.000
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.000
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.000
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.000
NECAME_12696 Necator americanus NECAME_12696 I 0.000
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.000
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.000
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.000
L889_g8361 Steinernema feltiae L889_g8361 I 0.000
L898_g10316 Steinernema monticolum L898_g10316 I 0.000
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.000
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.000