Bra021860 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra021860 T267942_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.870 0.978
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.870 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra021860.1-P Myb 47 114

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_03070 Aegilops tauschii F775_03070 I
F775_23301 Aegilops tauschii F775_23301 N
F775_23426 Aegilops tauschii F775_23426 N
LPERR06G04370 Leersia perrieri LPERR06G04370 N
LPERR06G04390 Leersia perrieri LPERR06G04390 N
LPERR06G12030 Leersia perrieri LPERR06G12030 N
LPERR06G12060 Leersia perrieri LPERR06G12060 N
LPERR10G06560 Leersia perrieri LPERR10G06560 N
BGIOSGA021814 Oryza indica BGIOSGA021814 N
OPUNC06G04640 Oryza punctata OPUNC06G04640 I
Pavir.Ca01211 Panicum virgatum Pavir.Ca01211 N
Pavir.J00203 Panicum virgatum Pavir.J00203 N
Sb10g005020 Sorghum bicolor Sb10g005020 I
Sb10g006570 Sorghum bicolor Sb10g006570 I
TRIUR3_31433 Triticum urartu TRIUR3_31433 N
TRIUR3_33433 Triticum urartu TRIUR3_33433 N