GSMUA_Achr4G20150_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr4G20150_001 T272438_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.778 0.882
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.775 0.849
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.775 0.849
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.775 0.849
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.774 0.892
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.774 0.882
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.774 0.882
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.749 0.828
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.749 0.828
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.749 0.828
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.749 0.828
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.749 0.828
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.741 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P20150_001 Myb 17 63
GSMUA_Achr4P20150_001 Myb 69 114

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

324 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008190 Aedes aegypti AAEL008190 N 0.000
AALB000200 Anopheles albimanus AALB000200 I 0.000
AARA003793 Anopheles arabiensis AARA003793 I 0.000
AATE012724 Anopheles atroparvus AATE012724 I 0.000
ACHR008323 Anopheles christyi ACHR008323 I 0.000
ACOM029390 Anopheles coluzzii ACOM029390 I 0.000
ACUA027275 Anopheles culicifacies ACUA027275 I 0.000
ADIR009414 Anopheles dirus ADIR009414 I 0.000
AEPI007123 Anopheles epiroticus AEPI007123 I 0.000
AFUN010726 Anopheles funestus AFUN010726 I 0.000
AGAP009983 Anopheles gambiae AGAP009983 I 0.000
AMAM007264 Anopheles maculatus AMAM007264 I 0.000
AMEC011376 Anopheles melas AMEC011376 I 0.000
AMEM008272 Anopheles merus AMEM008272 I 0.000
AMIN006744 Anopheles minimus AMIN006744 I 0.000
AQUA009094 Anopheles quadriannulatus AQUA009094 I 0.000
ASIS002214 Anopheles sinensis ASIS002214 I 0.000
ASTEI03995 Anopheles stephensi ASTEI03995 I 0.000
GB46156 Apis mellifera GB46156 N 0.000
ACEP23825 Atta cephalotes ACEP23825 I 0.000
BGIBMGA009116 Bombyx mori BGIBMGA009116 I 0.000
Cflo_08671--XP_001121050.1_APIME Camponotus floridanus Cflo_08671--XP_001121050.1_APIME I 0.000
CLEC001934 Cimex lectularius CLEC001934 I 0.000
CpipJ_CPIJ003113 Culex pipiens CpipJ_CPIJ003113 I 0.000
CPIJ003113 Culex quinquefasciatus CPIJ003113 I 0.000
KGM_16315 Danaus plexippus KGM_16315 N 0.000
YQE_06569 Dendroctonus ponderosae YQE_06569 N 0.000
GF14859 Drosophila ananassae FBgn0091886 I 0.000
GG24687 Drosophila erecta FBgn0116818 I 0.000
GH10058 Drosophila grimshawi FBgn0117539 I 0.000
net Drosophila melanogaster FBgn0002931 D 0.000
GI16429 Drosophila mojavensis FBgn0139177 I 0.000
GL13900 Drosophila persimilis FBgn0151505 I 0.000
GA11011 Drosophila pseudoobscura FBgn0071067 I 0.000
GM16704 Drosophila sechellia FBgn0171617 I 0.000
GD22993 Drosophila simulans FBgn0194385 I 0.000
GJ16214 Drosophila virilis FBgn0203399 I 0.000
GK21091 Drosophila willistoni FBgn0223083 I 0.000
GE16494 Drosophila yakuba FBgn0234011 I 0.000
HHAL005211-PA Halyomorpha halys HHAL005211-PA I 0.000
Hsal_05296--XP_001121050.1_APIME Harpegnathos saltator Hsal_05296--XP_001121050.1_APIME N 0.000
HMEL016722 Heliconius melpomene HMEL016722 N 0.000
LDEC018964 Leptinotarsa decemlineata LDEC018964 N 0.000
LCUP006840 Lucilia cuprina LCUP006840 I 0.000
MCINX005941 Melitaea cinxia MCINX005941 N 0.000
MDOA010091 Musca domestica MDOA010091 I 0.000
PHUM129210 Pediculus humanus PHUM129210 I 0.000
PPAI008042 Phlebotomus papatasi PPAI008042 N 0.000
SINV15468 Solenopsis invicta SINV15468 I 0.000
TC005579 Tribolium castaneum TC005579 N 0.000
L798_06974 Zootermopsis nevadensis L798_06974 I 0.000