CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR03G02180
(
Leersia perrieri
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
LPERR03G02180
T273683_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK26523.1
M01283_2.00
Cannabis sativa
NWHATTCYNN
NNRGAATDWN
PBM
Lambert et al.(2019)
pTH11304
0.727
0.809
AT2G40260
M07057_2.00
Arabidopsis thaliana
HHWDWAHATTCYHTN
NADRGAATDTWHWDD
Dap-seq
OMalley et al.(2016)
AT2G40260_col_a
0.706
0.745
AT2G40260
M07058_2.00
Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT
ADRGAATDTWHHNDDWHHNN
Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a
0.706
0.745
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.695
0.787
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.691
0.745
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.681
0.681
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.681
0.681
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR03G02180.1
Myb
21
72
RLRWTPDLHHCFVHAIHKLGGQDKATPKRVLQLMGVGGLTISHVKSHLQMYR
Links
Other
Myb/SANT
family TFs
Other
Leersia perrieri
TFs
481 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.00815.93.1
Aspergillus carbonarius
e_gw1.00815.93.1
N
gw1.00083.300.1
Aspergillus carbonarius
gw1.00083.300.1
N
CADANGAG00006610
Aspergillus niger
CADANGAG00006610
N
CADAORAG00005662
Aspergillus oryzae
CADAORAG00005662
N
BBA_08510
Beauveria bassiana
BBA_08510
N
COCC4DRAFT_64454
Bipolaris maydis
COCC4DRAFT_64454
N
PVAR5_1141
Byssochlamys spectabilis
PVAR5_1141
N
estExt_fgenesh1_pg.C_240014
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_240014
N
CFIO01_05805
Colletotrichum fioriniae
CFIO01_05805
N
CGGC5_11092
Colletotrichum gloeosporioides
CGGC5_11092
N
CH063_00115
Colletotrichum higginsianum
CH063_00115
N
CH063_13215
Colletotrichum higginsianum
CH063_13215
N
Cob_05129
Colletotrichum orbiculare
Cob_05129
N
A1O9_12743
Exophiala aquamarina
A1O9_12743
N
A1O9_00991
Exophiala aquamarina
A1O9_00991
N
A1O9_07021
Exophiala aquamarina
A1O9_07021
N
HMPREF1120_04133
Exophiala dermatitidis
HMPREF1120_04133
N
Z517_00801
Fonsecaea pedrosoi
Z517_00801
N
NechaG84128
Fusarium solani
NechaG84128
N
LEMA_P104170.1
Leptosphaeria maculans
LEMA_P104170.1
N
MGG_07361
Magnaporthe oryzae
MGG_07361
N
MAC_06004
Metarhizium acridum
MAC_06004
N
MANI_026073
Metarhizium anisopliae
MANI_026073
N
MBR_08937
Metarhizium brunneum
MBR_08937
N
fgenesh1_pg.sca_11_chr8_3_0000196
Nectria haematococca
fgenesh1_pg.sca_11_chr8_3_0000196
N
OIDMADRAFT_97438
Oidiodendron maius
OIDMADRAFT_97438
N
OIDMADRAFT_193465
Oidiodendron maius
OIDMADRAFT_193465
N
F503_02724
Ophiostoma piceae uamh
F503_02724
N
PMAA_001430
Penicillium marneffei
PMAA_001430
N
SBOR_5781
Sclerotinia borealis
SBOR_5781
N
PMAA_001430
Talaromyces marneffei
PMAA_001430
N