MTR_7g115550 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_7g115550 T274948_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.909 0.989
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.909 0.989
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.814 0.880
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH24587 Myb 7 53
KEH24587 Myb 59 103
KEH24588 Myb 7 53
KEH24588 Myb 59 103

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

575 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0001676401 Anisakis simplex ASIM_0001676401 N 0.000
CBN24253 Caenorhabditis brenneri CBN24253 N 0.000
CBG10038 Caenorhabditis briggsae CBG10038 N 0.000
gei-13 Caenorhabditis elegans WBGene00001570 N 0.000
CJA06713 Caenorhabditis japonica CJA06713 N 0.000
CRE25566 Caenorhabditis remanei CRE25566 N 0.000
HCOI00039700 Haemonchus contortus HCOI00039700 N 0.000
Hba_11216 Heterorhabditis bacteriophora Hba_11216 N 0.000
Ppa-gei-13 Pristionchus pacificus PPA19882 N 0.000
L889_g22347 Steinernema feltiae L889_g22347 N 0.000
L893_g18581 Steinernema glaseri L893_g18581 N 0.000
L898_g16670 Steinernema monticolum L898_g16670 N 0.000
L892_g20284 Steinernema scapterisci L892_g20284 N 0.000
SMUV_0000711101 Syphacia muris SMUV_0000711101 N 0.000