OGLUM06G26120 (Oryza glumaepatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OGLUM06G26120 T275770_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.687 0.742
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.687 0.742
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.670 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM06G26120.1 Myb 28 75
OGLUM06G26120.1 Myb 81 126

Links

Other Myb/SANT family TFs
Other Oryza glumaepatula TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_2305 Arabidopsis lyrata Al_scaffold_0004_2305 I 0.000
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.000
fgenesh1_pm.C_scaffold_4001818 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001818 I 0.000
WRKY54 Arabidopsis thaliana AT2G40750 I 0.000
WRKY70 Arabidopsis thaliana AT3G56400 D 0.000
Bostr.9345s0060 Boechera stricta Bostr.9345s0060 I 0.000
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.000
BRADI2G30695 Brachypodium distachyon BRADI2G30695 I 0.000
Bo6g071110 Brassica oleracea Bo6g071110 I 0.000
Bo8g090820 Brassica oleracea Bo8g090820 I 0.000
Bo4g190390 Brassica oleracea Bo4g190390 I 0.000
Bo4g012750 Brassica oleracea Bo4g012750 I 0.000
Bo3g035140 Brassica oleracea Bo3g035140 I 0.000
Bo00913s010 Brassica oleracea Bo00913s010 I 0.000
Bra000203 Brassica rapa Bra000203 I 0.000
Bra003239 Brassica rapa Bra003239 I 0.000
Bra004586 Brassica rapa Bra004586 I 0.000
Bra007243 Brassica rapa Bra007243 I 0.000
Bra014692 Brassica rapa Bra014692 I 0.000
Bra016974 Brassica rapa Bra016974 I 0.000
PK21378.1 Cannabis sativa PK21378.1 I 0.000
PK03324.1 Cannabis sativa PK03324.1 I 0.000
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.000
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I 0.000
Cagra.0086s0001 Capsella grandiflora Cagra.0086s0001 I 0.000
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.000
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.000
Carubv10001559m.g Capsella rubella Carubv10001559m.g I 0.000
evm.TU.contig_32256 Carica papaya evm.TU.contig_32256 I 0.000
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.000
Ca_04100 Cicer arietinum Ca_04100 I 0.000
Cla015244 Citrullus lanatus Cla015244 I 0.000
Cla007424 Citrullus lanatus Cla007424 I 0.000
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.000
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.000
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.000
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.000
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.000
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.000
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.000
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.000
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.000
Thhalv10016713m.g Eutrema salsugineum Thhalv10016713m.g I 0.000
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I 0.000
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.000
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.000
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.000
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.000
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.000
GLYMA14G36446 Glycine max GLYMA14G36446 I 0.000
GLYMA14G36438 Glycine max GLYMA14G36438 I 0.000
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.000
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.000
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.000
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.000
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I 0.000
Gorai.007G107300 Gossypium raimondii Gorai.007G107300 I 0.000
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.000
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.000
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.000
MLOC_66134 Hordeum vulgare MLOC_66134 I 0.000
MLOC_65699 Hordeum vulgare MLOC_65699 I 0.000
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.000
Lus10029021.g Linum usitatissimum Lus10029021.g I 0.000
Lus10034244.g Linum usitatissimum Lus10034244.g I 0.000
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.000
Lus10012870.g Linum usitatissimum Lus10012870.g I 0.000
chr1.CM0320.400.nd Lotus japonicus chr1.CM0320.400.nd I 0.000
MDP0000754989 Malus domestica MDP0000754989 I 0.000
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.000
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.000
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.000
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.000
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.000
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.000
MTR_5g067700 Medicago truncatula MTR_5g067700 I 0.000
mgf002542m Mimulus guttatus mgf002542m I 0.000
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I 0.000
OPUNC07G11930 Oryza punctata OPUNC07G11930 I 0.000
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I 0.000
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I 0.000
PDK_20s1440981g001 Phoenix dactylifera PDK_20s1440981g001 I 0.000
POPTR_0002s17010 Populus trichocarpa POPTR_0002s17010 I 0.000
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I 0.000
POPTR_0014s09190 Populus trichocarpa POPTR_0014s09190 I 0.000
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.000
Pm019286 Prunus mume Pm019286 I 0.000
29729.m002369 Ricinus communis 29729.m002369 I 0.000
29915.m000479 Ricinus communis 29915.m000479 I 0.000
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.000
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.000
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.000
Si022702m.g Setaria italica Si022702m.g I 0.000
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.000
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.000
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.000
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.000
TCM_005179 Theobroma cacao TCM_005179 I 0.000
TCM_006109 Theobroma cacao TCM_006109 I 0.000
TCM_045556 Theobroma cacao TCM_045556 I 0.000