ORUFI08G17610 (Oryza rufipogon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORUFI08G17610 T277041_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.888 0.957
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.776 0.796
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.776 0.796
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.752 0.806
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.752 0.806
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.736 0.742
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.736 0.742
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.718 0.763
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.718 0.763
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.704 0.806
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.704 0.806
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.675 0.742
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.666 0.720
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.666 0.720
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.662 0.785
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.662 0.774
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.662 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI08G17610.1 Myb 14 61
ORUFI08G17610.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Oryza rufipogon TFs

666 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_30082 Aegilops tauschii F775_30082 I 0.000
AMTR_s00018p00074980 Amborella trichopoda AMTR_s00018p00074980 I 0.000
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.000
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.000
NAC69 Arabidopsis thaliana AT4G01550 D 0.000
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.000
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I 0.000
Bo9g004070 Brassica oleracea Bo9g004070 I 0.000
Bra036328 Brassica rapa Bra036328 I 0.000
evm.TU.supercontig_3.170 Carica papaya evm.TU.supercontig_3.170 N 0.000
Ca_20988 Cicer arietinum Ca_20988 I 0.000
Ca_04069 Cicer arietinum Ca_04069 I 0.000
Ca_27204 Cicer arietinum Ca_27204 I 0.000
Cla002432 Citrullus lanatus Cla002432 N 0.000
orange1.1g021772m.g Citrus sinensis orange1.1g021772m.g N 0.000
Cucsa.273280 Cucumis sativus Cucsa.273280 N 0.000
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I 0.000
GLYMA02G38710 Glycine max GLYMA02G38710 N 0.000
GLYMA14G36840 Glycine max GLYMA14G36840 I 0.000
GLYMA12G31211 Glycine max GLYMA12G31211 I 0.000
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I 0.000
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I 0.000
Gorai.007G017500 Gossypium raimondii Gorai.007G017500 I 0.000
MLOC_50406 Hordeum vulgare MLOC_50406 I 0.000
LPERR08G03510 Leersia perrieri LPERR08G03510 I 0.000
Lus10015587.g Linum usitatissimum Lus10015587.g I 0.000
Lus10032919.g Linum usitatissimum Lus10032919.g I 0.000
MDP0000907489 Malus domestica MDP0000907489 N 0.000
MTR_3g093050 Medicago truncatula MTR_3g093050 I 0.000
MTR_5g069030 Medicago truncatula MTR_5g069030 I 0.000
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.000
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.000
mgf022344m Mimulus guttatus mgf022344m I 0.000
mgf015836m Mimulus guttatus mgf015836m I 0.000
GSMUA_Achr1G03560_001 Musa acuminata GSMUA_Achr1G03560_001 I 0.000
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.000
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I 0.000
GSMUA_Achr4G29170_001 Musa acuminata GSMUA_Achr4G29170_001 I 0.000
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I 0.000
GSMUA_Achr2G11810_001 Musa acuminata GSMUA_Achr2G11810_001 I 0.000
OBART08G03460 Oryza barthii OBART08G03460 I 0.000
OB08G13730 Oryza brachyantha OB08G13730 I 0.000
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I 0.000
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I 0.000
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.000
OLONG_000105 Oryza longistaminata OLONG_000105 I 0.000
OMERI08G03500 Oryza meridionalis OMERI08G03500 I 0.000
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.000
OPUNC08G03310 Oryza punctata OPUNC08G03310 I 0.000
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.000
OS08G0157900 Oryza sativa OS08G0157900 I 0.000
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I 0.000
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I 0.000
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.000
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I 0.000
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.000
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.000
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.000
Pm019659 Prunus mume Pm019659 I 0.000
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.000
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.000
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.000
Si013369m.g Setaria italica Si013369m.g I 0.000
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I 0.000
Solyc06g073050.2 Solanum lycopersicum Solyc06g073050.2 N 0.000
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I 0.000
Sb07g003900 Sorghum bicolor Sb07g003900 I 0.000
TCM_015535 Theobroma cacao TCM_015535 I 0.000
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I 0.000
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I 0.000
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I 0.000
TRIUR3_32613 Triticum urartu TRIUR3_32613 I 0.000
VIT_15s0048g02320 Vitis vinifera VIT_15s0048g02320 I 0.000
VIT_15s0048g02300 Vitis vinifera VIT_15s0048g02300 N 0.000
GRMZM2G003715 Zea mays GRMZM2G003715 I 0.000