POPTR_0001s13060 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0001s13060 T278184_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.909 1.000
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.909 1.000
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s13060.1 Myb 42 109

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
G210_2898 Candida maltosa G210_2898 N
CTRG_01280 Candida tropicalis CTRG_01280 N
DEHA2B04070g Debaryomyces hansenii DEHA2B04070g N
KLTH0E08778g Kluyveromyces thermotolerans KLTH0E08778g N
Kwal_17681 Kluyveromyces waltii Kwal_17681 N
PAS_chr1-3_0274 Komagataella pastoris PAS_chr1-3_0274 N
KUCA_T00003965001 Kuraishia capsulata KUCA_T00003965001 N
LALA0_S02e05402g Lachancea lanzarotensis LALA0_S02e05402g N
KLTH0E08778g Lachancea thermotolerans KLTH0E08778g N
GNLVRS01_PISO0A07920g Millerozyma farinosa GNLVRS01_PISO0A07920g N
GNLVRS01_PISO0B07987g Millerozyma farinosa GNLVRS01_PISO0B07987g N
XP_002489620.1 Pichia pastoris XP_002489620.1 N