TCM_041160 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_041160 T280631_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04760
M02304_2.00 		Arabidopsis thaliana
NDGATAAGGN
NCCTTATCHN		 PBM
Weirauch et al.(2014)
pTH7079 		0.684 0.777
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY33193 Myb 25 74
EOY33193 Myb 125 172
EOY33194 Myb 25 74
EOY33194 Myb 125 172

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00106p00065610 Amborella trichopoda AMTR_s00106p00065610 N 0.671
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.754
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.670
Aquca_004_00257 Aquilegia coerulea Aquca_004_00257 N 0.666
scaffold_600421.1 Arabidopsis lyrata scaffold_600421.1 I 0.684
AT5G04760 Arabidopsis thaliana AT5G04760 D 0.684
Bostr.13129s0486 Boechera stricta Bostr.13129s0486 I 0.684
Bo3g002960 Brassica oleracea Bo3g002960 I 0.684
Bo9g178980 Brassica oleracea Bo9g178980 I 0.684
Bra009432 Brassica rapa Bra009432 I 0.684
PK13672.1 Cannabis sativa PK13672.1 I 0.661
Cagra.5249s0014 Capsella grandiflora Cagra.5249s0014 I 0.684
Carubv10003623m.g Capsella rubella Carubv10003623m.g I 0.684
Ca_05454 Cicer arietinum Ca_05454 I 0.742
Cla020348 Citrullus lanatus Cla020348 I 0.666
Cla014242 Citrullus lanatus Cla014242 N 0.704
Cla013899 Citrullus lanatus Cla013899 N 0.701
Ciclev10016071m.g Citrus clementina Ciclev10016071m.g I 0.793
Cucsa.364590 Cucumis sativus Cucsa.364590 N 0.689
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.685
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.666
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.749
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.664
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.749
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.669
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.749
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.671
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.680
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.669
Gorai.006G118200 Gossypium raimondii Gorai.006G118200 I 0.716
Gorai.006G113100 Gossypium raimondii Gorai.006G113100 N 0.676
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.680
MDP0000610242 Malus domestica MDP0000610242 N 0.699
MDP0000289018 Malus domestica MDP0000289018 I 0.732
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.669
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.762
mgf016380m Mimulus guttatus mgf016380m N 0.665
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.674
GSMUA_Achr8G02260_001 Musa acuminata GSMUA_Achr8G02260_001 N 0.662
GSMUA_Achr11G09110_001 Musa acuminata GSMUA_Achr11G09110_001 N 0.705
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N 0.690
e_gw1.256.18.1 Physcomitrella patens e_gw1.256.18.1 N 0.690
POPTR_0010s24710 Populus trichocarpa POPTR_0010s24710 I 0.735
Pm017050 Prunus mume Pm017050 I 0.740
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.664
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.736
30131.m007263 Ricinus communis 30131.m007263 I 0.669
30055.m001589 Ricinus communis 30055.m001589 I 0.689
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.702
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.678
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.669
SapurV1A.0036s0350 Salix purpurea SapurV1A.0036s0350 I 0.738
Solyc04g008870.2 Solanum lycopersicum Solyc04g008870.2 N 0.672
Solyc05g055240.2 Solanum lycopersicum Solyc05g055240.2 N 0.676
Solyc11g006720.1 Solanum lycopersicum Solyc11g006720.1 N 0.699
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I 0.661
PGSC0003DMG400007603 Solanum tuberosum PGSC0003DMG400007603 N 0.723
PGSC0003DMG400023495 Solanum tuberosum PGSC0003DMG400023495 N 0.676
TCM_041362 Theobroma cacao TCM_041362 N 0.725
TCM_007672 Theobroma cacao TCM_007672 I 0.669
VIT_06s0080g00790 Vitis vinifera VIT_06s0080g00790 I 0.675
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.690