Pm005124 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm005124 T283469_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.818 0.939
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.782 0.924
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.781 0.864
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.781 0.864
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.755 0.848
Q948S6_TOBAC
M11075_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA1_01 		0.675 0.826
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.673 0.750
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.672 0.773
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm005124 Myb 9 48
Pm005124 Myb 54 100
Pm005124 Myb 106 150

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000012362 Ailuropoda melanoleuca ENSAMEG00000012362 I
ENSAMEG00000014505 Ailuropoda melanoleuca ENSAMEG00000014505 I
Alligator_sinensis_CCG021121.1 Alligator sinensis Alligator_sinensis_CCG021121.1 I
ENSAPLG00000005793 Anas platyrhynchos ENSAPLG00000005793 I
ENSAPLG00000008295 Anas platyrhynchos ENSAPLG00000008295 I
BNC2 Anolis carolinensis ENSACAG00000017743 I
Afo_R000157 Aptenodytes forsteri Afo_R000157 I
Afo_R010797 Aptenodytes forsteri Afo_R010797 I
ENSAMXG00000015422 Astyanax mexicanus ENSAMXG00000015422 I
ENSP00000307041-D1 Bos grunniens ENSP00000307041-D1 I
ENSP00000370047-D1 Bos grunniens ENSP00000370047-D1 I
BNC1 Bos taurus ENSBTAG00000015462 I
Brh_R001745 Buceros rhinoceros Brh_R001745 I
Brh_R009468 Buceros rhinoceros Brh_R009468 I
BNC2 Callithrix jacchus ENSCJAG00000012578 I
BNC1 Callithrix jacchus ENSCJAG00000015761 I
Aan_R013848 Calypte anna Aan_R013848 I
Aan_R015566 Calypte anna Aan_R015566 I
BNC2 Canis familiaris ENSCAFG00000001562 I
BNC1 Canis familiaris ENSCAFG00000013219 I
BNC2 Cavia porcellus ENSCPOG00000006163 I
BNC1 Cavia porcellus ENSCPOG00000009045 I
Cmyd_10011034 Chelonia mydas Cmyd_10011034 I
Cmyd_10014086 Chelonia mydas Cmyd_10014086 I
ENSCSAG00000009282 Chlorocebus sabaeus ENSCSAG00000009282 I
ENSCSAG00000017303 Chlorocebus sabaeus ENSCSAG00000017303 I
BNC2 Choloepus hoffmanni ENSCHOG00000006932 I
bnc2 Danio rerio ENSDARG00000069989 I
BNC1 Dasypus novemcinctus ENSDNOG00000010537 I
ENSDNOG00000040600 Dasypus novemcinctus ENSDNOG00000040600 I
Bnc1 Dipodomys ordii ENSDORG00000001268 I
Bnc2 Dipodomys ordii ENSDORG00000008840 I
BNC2 Echinops telfairi ENSETEG00000004420 I
BNC1 Echinops telfairi ENSETEG00000005529 I
BNC1 Equus caballus ENSECAG00000017409 I
BNC2 Equus caballus ENSECAG00000017503 I
BNC2 Erinaceus europaeus ENSEEUG00000002527 I
BNC1 Erinaceus europaeus ENSEEUG00000013292 I
BNC1 Felis catus ENSFCAG00000004847 I
BNC2 Felis catus ENSFCAG00000027700 I
ENSFALG00000003044 Ficedula albicollis ENSFALG00000003044 I
ENSFALG00000011147 Ficedula albicollis ENSFALG00000011147 I
BNC1 Gallus gallus ENSGALG00000006041 I
BNC2 Gallus gallus ENSGALG00000015101 I
Gfo_R001923 Geospiza fortis Gfo_R001923 I
Gfo_R004238 Geospiza fortis Gfo_R004238 I
BNC2 Gorilla gorilla ENSGGOG00000004532 I
BNC1 Gorilla gorilla ENSGGOG00000006610 I
BNC1 Homo sapiens ENSG00000169594 I
BNC2 Homo sapiens ENSG00000173068 I
ENSSTOG00000011561 Ictidomys tridecemlineatus ENSSTOG00000011561 I
ENSSTOG00000019904 Ictidomys tridecemlineatus ENSSTOG00000019904 I
ENSLACG00000017528 Latimeria chalumnae ENSLACG00000017528 I
ENSLOCG00000011896 Lepisosteus oculatus ENSLOCG00000011896 I
ENSLOCG00000012902 Lepisosteus oculatus ENSLOCG00000012902 I
BNC2 Loxodonta africana ENSLAFG00000000476 I
BNC1 Loxodonta africana ENSLAFG00000000536 I
ENSP00000307041 Macaca fascicularis ENSP00000307041 I
ENSP00000370047 Macaca fascicularis ENSP00000370047 I
BNC2 Macaca mulatta ENSMMUG00000001141 I
BNC1 Macaca mulatta ENSMMUG00000008188 I
ENSMEUG00000012369 Macropus eugenii ENSMEUG00000012369 I
ENSMEUG00000016184 Macropus eugenii ENSMEUG00000016184 I
BNC1 Meleagris gallopavo ENSMGAG00000007844 I
BNC1 Microcebus murinus ENSMICG00000015019 I
BNC2 Monodelphis domestica ENSMODG00000014900 I
BNC1 Monodelphis domestica ENSMODG00000019380 I
ENSMPUG00000004030 Mustela putorius furo ENSMPUG00000004030 I
ENSMPUG00000015509 Mustela putorius furo ENSMPUG00000015509 I
Bnc1 Mus musculus ENSMUSG00000025105 D
Bnc2 Mus musculus ENSMUSG00000028487 I
Myotis_brandtii_BNC1_10013186 Myotis brandtii Myotis_brandtii_BNC1_10013186 I
Myotis_brandtii_BNC2_10027298 Myotis brandtii Myotis_brandtii_BNC2_10027298 I
BNC2 Myotis lucifugus ENSMLUG00000004109 I
BNC1 Myotis lucifugus ENSMLUG00000014956 I
ENSNLEG00000010826 Nomascus leucogenys ENSNLEG00000010826 I
ENSNLEG00000017578 Nomascus leucogenys ENSNLEG00000017578 I
BNC2 Ochotona princeps ENSOPRG00000012145 I
BNC1 Ochotona princeps ENSOPRG00000012498 I
Ogr06244 Ophisaurus gracilis Ogr06244 I
ENSOANG00000004079 Ornithorhynchus anatinus ENSOANG00000004079 I
BNC2 Ornithorhynchus anatinus ENSOANG00000012860 I
BNC1 Oryctolagus cuniculus ENSOCUG00000000136 I
BNC2 Oryctolagus cuniculus ENSOCUG00000004460 I
BNC2 Otolemur garnettii ENSOGAG00000001628 I
BNC1 Otolemur garnettii ENSOGAG00000012148 I
ENSOARG00000014059 Ovis aries ENSOARG00000014059 I
ENSOARG00000014185 Ovis aries ENSOARG00000014185 I
BNC1 Pan troglodytes ENSPTRG00000007392 I
BNC2 Pan troglodytes ENSPTRG00000020789 I
ENSPANG00000015607 Papio anubis ENSPANG00000015607 I
ENSPANG00000025234 Papio anubis ENSPANG00000025234 I
ENSPSIG00000007268 Pelodiscus sinensis ENSPSIG00000007268 I
ENSPSIG00000018240 Pelodiscus sinensis ENSPSIG00000018240 I
ENSPMAG00000002267 Petromyzon marinus ENSPMAG00000002267 I
Pvit_01426 Pogona vitticeps Pvit_01426 I
Pvit_13632 Pogona vitticeps Pvit_13632 I
ENSPPYG00000019203 Pongo abelii ENSPPYG00000019203 I
BNC2 Procavia capensis ENSPCAG00000000849 I
BNC1 Pteropus vampyrus ENSPVAG00000008256 I
BNC2 Pteropus vampyrus ENSPVAG00000015905 I
Bnc2 Rattus norvegicus ENSRNOG00000006553 I
Bnc1 Rattus norvegicus ENSRNOG00000019770 I
ENSSHAG00000018273 Sarcophilus harrisii ENSSHAG00000018273 I
BNC2 Sorex araneus ENSSARG00000012472 I
BNC1 Sus scrofa ENSSSCG00000001798 I
BNC2 Sus scrofa ENSSSCG00000005180 I
ENSSSCG00000025613 Sus scrofa ENSSSCG00000025613 I
BNC2 Taeniopygia guttata ENSTGUG00000004482 I
BNC1 Taeniopygia guttata ENSTGUG00000007753 I
ENSTSYG00000004934 Tarsius syrichta ENSTSYG00000004934 I
ENSTSYG00000007392 Tarsius syrichta ENSTSYG00000007392 I
BNC1 Tupaia belangeri ENSTBEG00000009591 I
BNC1 Tursiops truncatus ENSTTRG00000004952 I
BNC2 Tursiops truncatus ENSTTRG00000013676 I
Tal_R005923 Tyto alba Tal_R005923 I
Tal_R008092 Tyto alba Tal_R008092 I
BNC1 Vicugna pacos ENSVPAG00000004601 I
bnc1 Xenopus tropicalis XB-GENE-1217655 I
bnc2 Xenopus tropicalis XB-GENE-953157 I