cassava36126.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava36126.valid.m1 T284228_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.899 0.957
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.891 0.935
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.891 0.935
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.854 0.891
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.854 0.891
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.800 0.826
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.800 0.826
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.800 0.826
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.800 0.826
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.800 0.826
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.767 0.848
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.767 0.848
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.767 0.848
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.766 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava36126.valid.m1 Myb 24 69

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL004255 Aedes aegypti AAEL004255 I
AAEL013770 Aedes aegypti AAEL013770 I
ANCCAN_13506 Ancylostoma caninum ANCCAN_13506 I
ANCCEY_05862 Ancylostoma ceylanicum ANCCEY_05862 I
ANCDUO_02710 Ancylostoma duodenale ANCDUO_02710 I
AATE010559 Anopheles atroparvus AATE010559 I
ACOM039487 Anopheles coluzzii ACOM039487 I
ACUA020082 Anopheles culicifacies ACUA020082 I
ADAC005262 Anopheles darlingi ADAC005262 I
AFAF006673 Anopheles farauti AFAF006673 I
AFUN002606 Anopheles funestus AFUN002606 I
AGAP006592 Anopheles gambiae AGAP006592 I
AMEC005588 Anopheles melas AMEC005588 I
AMEM000073 Anopheles merus AMEM000073 I
ASIS005657 Anopheles sinensis ASIS005657 I
GB51060 Apis mellifera GB51060 I
ASU_05469 Ascaris suum ASU_05469 I
ACEP26221 Atta cephalotes ACEP26221 I
BGIBMGA000319 Bombyx mori BGIBMGA000319 I
Bm3574 Brugia malayi Bm3574 I
BTMF_0000836601 Brugia timori BTMF_0000836601 I
BXY_0993100 Bursaphelenchus xylophilus BXY_0993100 I
CBN18993 Caenorhabditis brenneri CBN18993 I
CBG02201 Caenorhabditis briggsae CBG02201 I
blmp-1 Caenorhabditis elegans WBGene00003847 D
CRE29848 Caenorhabditis remanei CRE29848 I
Cflo_04377--XP_391847.3_APIME Camponotus floridanus Cflo_04377--XP_391847.3_APIME I
CLEC009125 Cimex lectularius CLEC009125 I
CpipJ_CPIJ007425 Culex pipiens CpipJ_CPIJ007425 I
CPIJ007425 Culex quinquefasciatus CPIJ007425 I
KGM_16647 Danaus plexippus KGM_16647 I
DAPPUDRAFT_319330 Daphnia pulex DAPPUDRAFT_319330 I
nDi.2.2.2.g10740 Dirofilaria immitis nDi.2.2.2.g10740 I
DME_0000608401 Dracunculus medinensis DME_0000608401 I
GF23985 Drosophila ananassae FBgn0100979 I
GG15278 Drosophila erecta FBgn0107530 I
GH16462 Drosophila grimshawi FBgn0123933 I
Blimp-1 Drosophila melanogaster FBgn0035625 D
GA23469 Drosophila pseudoobscura FBgn0244871 I
GM14713 Drosophila sechellia FBgn0169634 I
GJ13412 Drosophila virilis FBgn0200637 I
GK17303 Drosophila willistoni FBgn0219302 I
GE21501 Drosophila yakuba FBgn0238758 I
EVEC_0000549701 Enterobius vermicularis EVEC_0000549701 I
HCOI00760100 Haemonchus contortus HCOI00760100 I
HPLM_0001789201 Haemonchus placei HPLM_0001789201 I
HHAL002221-PA Halyomorpha halys HHAL002221-PA I
HMEL007072 Heliconius melpomene HMEL007072 I
Hba_09212 Heterorhabditis bacteriophora Hba_09212 I
nLs.2.1.2.g09168 Litomosoides sigmodontis nLs.2.1.2.g09168 I
LOAG_11444 Loa loa LOAG_11444 I
LCUP008191 Lucilia cuprina LCUP008191 I
MCINX009345 Melitaea cinxia MCINX009345 I
snap_masked-nMf.1.1.scaf01565-processed-gene-0.4 Meloidogyne floridensis snap_masked-nMf.1.1.scaf01565-processed-gene-0.4 N
MhA1_Contig1748.frz3.gene3 Meloidogyne hapla MhA1_Contig1748.frz3.gene3 N
Minc14190 Meloidogyne incognita Minc14190 N
MDOA000384 Musca domestica MDOA000384 I
NV12817 Nasonia vitripennis NV12817 I
NBR_0002088601 Nippostrongylus brasiliensis NBR_0002088601 I
nOo.2.0.1.g07043 Onchocerca ochengi nOo.2.0.1.g07043 I
WBGene00238199 Onchocerca volvulus WBGene00238199 I
PHUM607020 Pediculus humanus PHUM607020 I
PPAI008567 Phlebotomus papatasi PPAI008567 I
scaffold607-EXSNAP2012.2 Pristionchus exspectatus scaffold607-EXSNAP2012.2 N
Ppa-blmp-1 Pristionchus pacificus PPA04977 N
RPRC001983 Rhodnius prolixus RPRC001983 I
SINV14078 Solenopsis invicta SINV14078 I
SMAR011793 Strigamia maritima SMAR011793 I
SMUV_0001104401 Syphacia muris SMUV_0001104401 I
TELCIR_19105 Teladorsagia circumcincta TELCIR_19105 I
TCLT_0000472801 Thelazia callipaeda TCLT_0000472801 I
TCNE_0001220201 Toxocara canis TCNE_0001220201 I
TC014741 Tribolium castaneum TC014741 I
D917_07972 Trichinella nativa D917_07972 I
EFV52614 Trichinella spiralis EFV52614 I
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I
WUBG_04696 Wuchereria bancrofti WUBG_04696 I
L798_14234 Zootermopsis nevadensis L798_14234 I