cassava40545.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava40545.m1 T284265_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.799 0.723
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.799 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava40545.m1 Myb 4 72

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ba02946 Panicum virgatum Pavir.Ba02946 N
Pavir.J09527 Panicum virgatum Pavir.J09527 N