Cucsa.352560 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.352560 T284540_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.834 0.871
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.834 0.871
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.820 0.849
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.810 0.860
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.778 0.839
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.778 0.839
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.778 0.839
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.736 0.817
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.736 0.817
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.736 0.817
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.736 0.817
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.736 0.817
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.680 0.731
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.666 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.352560.1 Myb 9 55
Cucsa.352560.1 Myb 61 106

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

317 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010559 Ailuropoda melanoleuca ENSAMEG00000010559 I 0.000
ENSAPLG00000008769 Anas platyrhynchos ENSAPLG00000008769 I 0.000
Afo_R003471 Aptenodytes forsteri Afo_R003471 I 0.000
BGLB005801 Biomphalaria glabrata BGLB005801 I 0.000
ENSCJAG00000001029 Callithrix jacchus ENSCJAG00000001029 I 0.000
Aan_R001040 Calypte anna Aan_R001040 I 0.000
ENSCAFG00000002448 Canis familiaris ENSCAFG00000002448 I 0.000
CapteG145851 Capitella teleta CapteG145851 I 0.000
ENSCPOG00000005481 Cavia porcellus ENSCPOG00000005481 I 0.000
ENSCSAG00000013508 Chlorocebus sabaeus ENSCSAG00000013508 I 0.000
CGI_10012885 Crassostrea gigas CGI_10012885 I 0.000
ENSDNOG00000003198 Dasypus novemcinctus ENSDNOG00000003198 I 0.000
Ahr Dipodomys ordii ENSDORG00000007750 I 0.000
ENSETEG00000019660 Echinops telfairi ENSETEG00000019660 I 0.000
ENSGALG00000010836 Gallus gallus ENSGALG00000010836 I 0.000
ahr1b Gasterosteus aculeatus ENSGACG00000015615 I 0.000
Gfo_R002789 Geospiza fortis Gfo_R002789 I 0.000
ENSGGOG00000011367 Gorilla gorilla ENSGGOG00000011367 I 0.000
AHR Homo sapiens ENSG00000106546 D 0.000
XP_002161735.1 Hydra magnipapillata XP_002161735.1 I 0.000
ENSSTOG00000003086 Ictidomys tridecemlineatus ENSSTOG00000003086 I 0.000
ENSLACG00000002803 Latimeria chalumnae ENSLACG00000002803 I 0.000
LotgiG117861 Lottia gigantea LotgiG117861 I 0.000
ENSLAFG00000015328 Loxodonta africana ENSLAFG00000015328 I 0.000
ENSP00000385642 Macaca fascicularis ENSP00000385642 I 0.000
ENSMMUG00000012203 Macaca mulatta ENSMMUG00000012203 I 0.000
ENSMGAG00000010174 Meleagris gallopavo ENSMGAG00000010174 I 0.000
ENSMODG00000001528 Monodelphis domestica ENSMODG00000001528 I 0.000
ENSMPUG00000013964 Mustela putorius furo ENSMPUG00000013964 I 0.000
Ahr Mus musculus ENSMUSG00000019256 D 0.000
Myotis_brandtii_AHR_10031750 Myotis brandtii Myotis_brandtii_AHR_10031750 I 0.000
ENSMLUG00000000097 Myotis lucifugus ENSMLUG00000000097 I 0.000
ENSOPRG00000010358 Ochotona princeps ENSOPRG00000010358 I 0.000
AHR Oryctolagus cuniculus ENSOCUG00000003877 I 0.000
ENSOGAG00000012656 Otolemur garnettii ENSOGAG00000012656 I 0.000
ENSOARG00000009234 Ovis aries ENSOARG00000009234 I 0.000
AHR Pan troglodytes ENSPTRG00000018955 I 0.000
ENSPANG00000002444 Papio anubis ENSPANG00000002444 I 0.000
ENSPSIG00000010051 Pelodiscus sinensis ENSPSIG00000010051 I 0.000
ENSPPYG00000017758 Pongo abelii ENSPPYG00000017758 I 0.000
ENSPCAG00000006894 Procavia capensis ENSPCAG00000006894 I 0.000
PXEA_0000742401 Protopolystoma xenopodis PXEA_0000742401 I 0.000
ENSPVAG00000002167 Pteropus vampyrus ENSPVAG00000002167 I 0.000
Ahr Rattus norvegicus ENSRNOG00000004342 I 0.000
ENSSHAG00000001563 Sarcophilus harrisii ENSSHAG00000001563 I 0.000
SMU15013078 Schmidtea mediterranea SMU15013078 I 0.000
SMU15033026 Schmidtea mediterranea SMU15033026 I 0.000
SPU_005022 Strongylocentrotus purpuratus SPU_005022 I 0.000
AHR Sus scrofa ENSSSCG00000030484 I 0.000
ENSSSCG00000015364 Sus scrofa ENSSSCG00000015364 I 0.000
ENSTGUG00000002585 Taeniopygia guttata ENSTGUG00000002585 I 0.000
ENSTSYG00000010830 Tarsius syrichta ENSTSYG00000010830 I 0.000
ENSTBEG00000007210 Tupaia belangeri ENSTBEG00000007210 I 0.000
ENSTTRG00000006913 Tursiops truncatus ENSTTRG00000006913 I 0.000
Tal_R011867 Tyto alba Tal_R011867 I 0.000
ENSVPAG00000008443 Vicugna pacos ENSVPAG00000008443 I 0.000