CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf025004m
(
Mimulus guttatus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
mgf025004m
T285413_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtMYB40
M07126_2.00
Arabidopsis thaliana
YYYACCWAMYHHH
DDDRKTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB40_col_a
0.687
0.806
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf025004m
Myb
14
61
RGPWTMEEDDKLMHYILNNGIQCWRLVPKHAGLMRCGKSCRLRWINYL
mgf025004m
Myb
67
112
RGAFTEAEEDMIIELHSRLGNRWSKIAAHFGGRTDNEIKNHWNTRI
Links
Other
Myb/SANT
family TFs
Other
Mimulus guttatus
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_22853
Aegilops tauschii
F775_22853
N
Ciclev10009336m.g
Citrus clementina
Ciclev10009336m.g
I
orange1.1g037024m.g
Citrus sinensis
orange1.1g037024m.g
I
OBART01G29250
Oryza barthii
OBART01G29250
N
OB01G38240
Oryza brachyantha
OB01G38240
N
OGLUM01G33320
Oryza glumaepatula
OGLUM01G33320
N
BGIOSGA004364
Oryza indica
BGIOSGA004364
N
ONIVA01G33470
Oryza nivara
ONIVA01G33470
N
ORUFI01G32340
Oryza rufipogon
ORUFI01G32340
N
OS01G0722300
Oryza sativa
OS01G0722300
N
Pavir.J15551
Panicum virgatum
Pavir.J15551
I
Pavir.Eb02926
Panicum virgatum
Pavir.Eb02926
N
Pavir.Ea02676
Panicum virgatum
Pavir.Ea02676
N
Si004558m.g
Setaria italica
Si004558m.g
N
Sb03g033160
Sorghum bicolor
Sb03g033160
N
TRAES3BF016200140CFD_g
Triticum aestivum
TRAES3BF016200140CFD_g
N
Traes_3AL_7C031019E
Triticum aestivum
Traes_3AL_7C031019E
N
TRIUR3_05615
Triticum urartu
TRIUR3_05615
N
TRIUR3_25771
Triticum urartu
TRIUR3_25771
N
GRMZM2G167829
Zea mays
GRMZM2G167829
N
GRMZM2G151205
Zea mays
GRMZM2G151205
N