Bostr.0556s0467 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.0556s0467 T285657_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.731 0.892
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.718 0.892
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.718 0.892
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0556s0467.1.p Myb 16 63
Bostr.0556s0467.1.p Myb 69 114

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
H311_00925 Anncaliia algerae H311_00925 N 0.000
TRIM56 Anolis carolinensis ENSACAG00000007859 N 0.000
Bra032973 Brassica rapa Bra032973 N 0.000
PVAR5_0486 Byssochlamys spectabilis PVAR5_0486 N 0.000
CAOG_03637 Capsaspora owczarzaki CAOG_03637 N 0.000
fgenesh1_pg.C_scaffold_4001082 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4001082 N 0.000
CGOC_0000468301 Cylicostephanus goldi CGOC_0000468301 N 0.000
GF19613 Drosophila ananassae FBgn0096620 N 0.000
GK18872 Drosophila willistoni FBgn0220870 N 0.000
GE16904 Drosophila yakuba FBgn0234394 N 0.000
Hsal_00106--NA Harpegnathos saltator Hsal_00106--NA N 0.000
LPERR02G20610 Leersia perrieri LPERR02G20610 N 0.000
Lus10042195.g Linum usitatissimum Lus10042195.g N 0.000
Lus10019949.g Linum usitatissimum Lus10019949.g N 0.000
BLOC1S6 Loxodonta africana ENSLAFG00000000655 N 0.000
fgenesh2_pg.scaffold_12000136 Monosiga brevicollis fgenesh2_pg.scaffold_12000136 N 0.000
OB07G12490 Oryza brachyantha OB07G12490 N 0.000
BGIOSGA037077 Oryza indica BGIOSGA037077 N 0.000
OLONG_002570 Oryza longistaminata OLONG_002570 I 0.000
ORUFI12G05060 Oryza rufipogon ORUFI12G05060 N 0.000
ORUFI11G04600 Oryza rufipogon ORUFI11G04600 N 0.000
Pavir.Fa00930 Panicum virgatum Pavir.Fa00930 N 0.000
JL09_g6305 Pichia kudriavzevii JL09_g6305 N 0.000
EFA80760.1 Polysphondylium pallidum EFA80760.1 N 0.000
PRUPE_ppa024046mg Prunus persica PRUPE_ppa024046mg N 0.000
Sec61g-ps1 Rattus norvegicus ENSRNOG00000049451 N 0.000
Sec61gl Rattus norvegicus ENSRNOG00000049016 N 0.000
BLOC1S6 Sorex araneus ENSSARG00000009861 N 0.000
Sb02g013020 Sorghum bicolor Sb02g013020 N 0.000
TRIUR3_02266 Triticum urartu TRIUR3_02266 N 0.000
ZBAI_00205 Zygosaccharomyces bailii ZBAI_00205 N 0.000