Eucgr.C00947 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.C00947 T286792_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.661 0.710
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.661 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C00947.1 Myb 14 62
Eucgr.C00947.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.000
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.000
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.000
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.000
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.000
WRKY67 Arabidopsis thaliana AT1G66550 I 0.000
WRKY64 Arabidopsis thaliana AT1G66560 I 0.000
WRKY63 Arabidopsis thaliana AT1G66600 D 0.000
WRKY66 Arabidopsis thaliana AT1G80590 I 0.000
WRKY62 Arabidopsis thaliana AT5G01900 D 0.000
WRKY38 Arabidopsis thaliana AT5G22570 D 0.000
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.000
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.000
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.000
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.000
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.000
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.000
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.000
Bo2g024040 Brassica oleracea Bo2g024040 I 0.000
Bo2g095820 Brassica oleracea Bo2g095820 I 0.000
Bo5g068250 Brassica oleracea Bo5g068250 I 0.000
Bra002421 Brassica rapa Bra002421 I 0.000
Bra008454 Brassica rapa Bra008454 I 0.000
Bra008459 Brassica rapa Bra008459 I 0.000
Bra020196 Brassica rapa Bra020196 I 0.000
Bra020197 Brassica rapa Bra020197 I 0.000
Bra023211 Brassica rapa Bra023211 I 0.000
Bra028918 Brassica rapa Bra028918 I 0.000
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.000
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.000
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.000
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.000
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.000
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.000
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.000
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.000
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.000
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.000
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.000
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.000
Ca_12915 Cicer arietinum Ca_12915 I 0.000
Ca_18932 Cicer arietinum Ca_18932 I 0.000
Cla018337 Citrullus lanatus Cla018337 I 0.000
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.000
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.000
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.000
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.000
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.000
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.000
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.000
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.000
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.000
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.000
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.000
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.000
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.000
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.000
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.000
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.000
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.000
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.000
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.000
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.000
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.000
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.000
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.000
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.000
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.000
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.000
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.000
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.000
OBART03G16400 Oryza barthii OBART03G16400 I 0.000
OBART05G20330 Oryza barthii OBART05G20330 I 0.000
OB05G17240 Oryza brachyantha OB05G17240 I 0.000
OB05G27850 Oryza brachyantha OB05G27850 I 0.000
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.000
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.000
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I 0.000
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.000
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.000
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.000
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.000
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.000
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.000
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.000
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.000
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.000
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.000
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.000
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.000
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.000
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.000
OS03G0335200 Oryza sativa OS03G0335200 I 0.000
OS05G0478800 Oryza sativa OS05G0478800 I 0.000
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.000
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.000
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.000
Pm003014 Prunus mume Pm003014 I 0.000
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.000
29729.m002369 Ricinus communis 29729.m002369 I 0.000
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.000
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.000
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.000
Si025181m.g Setaria italica Si025181m.g I 0.000
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.000
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.000
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.000
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000