evm.TU.supercontig_116.38 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_116.38 T287042_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.784 0.839
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_116.38 Myb 9 56
evm.model.supercontig_116.38 Myb 62 107

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_015_00085 Aquilegia coerulea Aquca_015_00085 I 0.675
Aquca_015_00088 Aquilegia coerulea Aquca_015_00088 I 0.709
Aquca_015_00090 Aquilegia coerulea Aquca_015_00090 I 0.694
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.710
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I 0.759
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.817
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.788
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I 0.737
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.815
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.806
MYB75 Arabidopsis thaliana AT1G56650 I 0.800
MYB113 Arabidopsis thaliana AT1G66370 D 0.784
MYB114 Arabidopsis thaliana AT1G66380 I 0.821
MYB90 Arabidopsis thaliana AT1G66390 I 0.806
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.809
Bo00835s060 Brassica oleracea Bo00835s060 I 0.810
Bo6g099880 Brassica oleracea Bo6g099880 I 0.821
Bo6g100940 Brassica oleracea Bo6g100940 I 0.824
Bra001917 Brassica rapa Bra001917 I 0.811
Bra004162 Brassica rapa Bra004162 I 0.821
Bra039763 Brassica rapa Bra039763 I 0.810
PK05760.1 Cannabis sativa PK05760.1 I 0.799
PK17827.1 Cannabis sativa PK17827.1 I 0.768
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.741
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.753
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.767
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.804
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.821
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.804
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.759
evm.TU.contig_42663.2 Carica papaya evm.TU.contig_42663.2 I 0.809
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.909
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I 0.677
Ca_19630 Cicer arietinum Ca_19630 I 0.698
Ca_22078 Cicer arietinum Ca_22078 I 0.705
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.799
Cucsa.277570 Cucumis sativus Cucsa.277570 I 0.688
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I 0.691
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.724
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I 0.664
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I 0.664
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I 0.674
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I 0.670
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.821
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.719
GLYMA07G16980 Glycine max GLYMA07G16980 I 0.697
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.714
GLYMA09G37010 Glycine max GLYMA09G37010 I 0.719
GLYMA18G41520 Glycine max GLYMA18G41520 I 0.701
GLYMA18G49670 Glycine max GLYMA18G49670 I 0.703
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.710
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.802
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.802
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I 0.718
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.733
Lus10009129.g Linum usitatissimum Lus10009129.g I 0.673
Lus10009130.g Linum usitatissimum Lus10009130.g I 0.700
Lus10028513.g Linum usitatissimum Lus10028513.g I 0.700
Lus10028514.g Linum usitatissimum Lus10028514.g I 0.673
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.735
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I 0.704
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I 0.698
MDP0000192051 Malus domestica MDP0000192051 I 0.695
MDP0000478453 Malus domestica MDP0000478453 I 0.678
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.726
MTR_0193s0090 Medicago truncatula MTR_0193s0090 I 0.668
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I 0.698
MTR_0247s0040 Medicago truncatula MTR_0247s0040 I 0.699
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.727
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.726
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.723
MTR_5g078930 Medicago truncatula MTR_5g078930 I 0.690
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.735
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.713
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.731
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.745
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.704
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.725
mgf019317m Mimulus guttatus mgf019317m I 0.737
mgf022565m Mimulus guttatus mgf022565m I 0.675
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.661
POPTR_0005s14450 Populus trichocarpa POPTR_0005s14450 I 0.662
POPTR_0005s14460 Populus trichocarpa POPTR_0005s14460 I 0.664
POPTR_0005s14470 Populus trichocarpa POPTR_0005s14470 I 0.664
POPTR_0005s14480 Populus trichocarpa POPTR_0005s14480 I 0.673
Pm025429 Prunus mume Pm025429 I 0.671
Pm029440 Prunus mume Pm029440 I 0.745
Pm029442 Prunus mume Pm029442 I 0.748
Pm029445 Prunus mume Pm029445 I 0.787
Pm031337 Prunus mume Pm031337 I 0.671
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I 0.684
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I 0.707
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I 0.670
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.752
27763.m000042 Ricinus communis 27763.m000042 I 0.762
30128.m008730 Ricinus communis 30128.m008730 I 0.694
SapurV1A.0230s0260 Salix purpurea SapurV1A.0230s0260 I 0.661
Si038905m.g Setaria italica Si038905m.g I 0.668
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.759
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.765
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.765
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.769
TCM_019192 Theobroma cacao TCM_019192 I 0.802
TCM_026054 Theobroma cacao TCM_026054 I 0.726
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.738
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I 0.726
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.761
VIT_02s0033g00430 Vitis vinifera VIT_02s0033g00430 I 0.696
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.761
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I 0.732
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.768
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I 0.676